EnhancerDB
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Enhancers that regulate GARNL3[ENSG00000136895.14]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 129887225 129898621 enh26015 129986544 87923
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Placenta Thyroid Muscle (Myoblast) Pancreas Spleen Uterus Heart
chr9 129889359 129889542 vista63463 129986544 97002
VISTA
chr9 129892046 129892350 vista63464 129986544 94194
VISTA
chr9 129905045 129909569 enh66738 129986544 76975
Stomach Uterus Heart
chr9 129914745 129919326 enh42307 129986544 67218
Astrocyte Peripheral Blood (MM.1S) Uterus Bone (Osteoblast)
chr9 129919527 129928034 enh42308 129986544 58510
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Blood (GM12878) Muscle (A673) Adrenal Uterus Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr9 129929259 129929425 vista63465 129986544 57119
VISTA
chr9 129932425 129936815 enh26016 129986544 49729
Placenta
chr9 129943345 129953535 enh26017 129986544 33009
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Thyroid Muscle (Myoblast) Breast Muscle (Myotube) Uterus Heart
chr9 129951111 129951299 vista63466 129986544 35245
VISTA
chr9 129955705 129959855 enh111300 129986544 26689
Cervix (HeLa-S3)
chr9 129962932 129969655 enh66739 129986544 16889
Uterus Brain (SK-N-SH) Heart
chr9 129994245 130002375 enh98297 129986544 7701
Uterus Epithelial (MCF-7)
chr9 130010991 130023415 enh66740 129986544 24447
Neural Stem Cells (H9) Heart
chr9 130028399 130032791 enh87516 129986544 41855
Blood (GM12878)
chr9 130036891 130050555 enh61649 129986544 50347
Liver (HepG2) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Lung (PC-9) Spleen Heart
chr9 130053705 130058235 enh100967 129986544 67161
Adrenal Uterus
chr9 130061254 130065404 enh66741 129986544 74710
Heart
chr9 130068246 130073641 enh26018 129986544 81702
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Large Intestine Liver Placenta Adrenal Lung (PC-9) Uterus Heart
Transcript facotrs that regulate GARNL3[ENSG00000136895.14]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GARNL3[ENSG00000136895.14], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 129479487 rs371715279 G A 507057 Heart 0.302345 11306057
chr9 129230833 rs10987290 C G 755711 Pancreas 0.197467 11304191
chr9 129013387 rs112329655 C T 973157 Spleen 0.166018 11302828
chr9 130007681 rs2779734 C T 0 Liver 0.0307246 11309207
chr9 129636525 rs11794500 T C 350019 Adrenal 0.137884 11307098
Details of GARNL3[ENSG00000136895.14]
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Genomic Location chr9:129986544-130155939[+]
TSS 129986544
Gene Name GARNL3
Ensembl ID ENSG00000136895.14
ENTREZID 84253
Uniprot
B4DH81
Q5VVW2
Protein Name
GTPase-activating Rap/Ran-GAP domain-like protein 3
Expression levels of GARNL3[ENSG00000136895.14]
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