EnhancerDB
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Enhancers that regulate RNF38[ENSG00000137075.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 36380565 36388655 enh73636 36487545 98890
Blood (GM12878) Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr9 36390625 36394775 enh41880 36487545 92770
Astrocyte
chr9 36394931 36409715 enh10725 36487545 77830
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Stomach Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Spleen Blood (T-cell) Heart
chr9 36413831 36422287 enh73637 36487545 65258
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr9 36425085 36434955 enh25557 36487545 52590
Placenta Cervix (HeLa-S3)
chr9 36435005 36439155 enh110629 36487545 48390
Adrenal
chr9 36440027 36454195 enh73638 36487545 33350
Prostate (PC-3) Prostate (RWPE1) Thyroid Lung (PC-9) Pancreas Neural Stem Cells (H9)
chr9 36455985 36464537 enh49487 36487545 23008
Brain (SK-N-MC) Blood (T-cell) Blood (GM12878) Thyroid Uterus Neural Stem Cells (H9) Thymus Stomach
chr9 36468060 36473795 enh10726 36487545 13750
Skin (Keratinocyte) Large Intestine Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Uterus Thymus Heart
chr9 36471008 36471193 vista61886 36487545 16352
VISTA
chr9 36477125 36481275 enh78698 36487545 6270
Muscle (A673)
chr9 36497585 36506415 enh10727 36487545 10040
Liver (HepG2) Large Intestine Thymus Blood (Karpas-422) Blood (T-cell)
chr9 36528385 36534615 enh89321 36487545 40840
Pancreas
chr9 36541984 36546389 enh46733 36487545 54439
Muscle (Myotube) Prostate (RWPE1)
chr9 36549867 36563175 enh25558 36487545 62322
Placenta Neural Stem Cells (H9) Lung (PC-9) Blood (GM12878)
chr9 36563525 36567675 enh25559 36487545 75980
Placenta
chr9 36574185 36579115 enh41881 36487545 86640
Muscle (Myoblast) Astrocyte Liver (HepG2)
Transcript facotrs that regulate RNF38[ENSG00000137075.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RNF38[ENSG00000137075.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 36129718 rs7850463 G T 206675 Esophagus 0.142164 11006526
chr9 36308049 rs7853371 C T 28344 Esophagus 0.203753 11007663
chr9 36613467 rs146471908 T C 125922 Heart 0.147079 11009578
chr9 35655924 rs7043881 G C 680469 Pancreas 0.20997 11004402
chr9 36447046 rs111929430 C T 0 Breast 0.00447751 11008592
chr9 37412155 rs1571232 C T 924610 Spleen 0.292882 11014698
chr9 36842361 rs75446451 C T 354816 Ovary 0.282668 11010326
chr9 36731326 rs1887432 T C 243781 Thyroid 0.118343 11010051
chr9 36435005 rs6476556 C T 0 Lung 0.0163935 11008490
chr9 36842361 rs75446451 C T 354816 Stomach 0.311965 11010326
Details of RNF38[ENSG00000137075.13]
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Genomic Location chr9:36336393-36487545[-]
TSS 36487545
Gene Name RNF38
Ensembl ID ENSG00000137075.13
ENTREZID 152006
Uniprot
Q9H0F5
Protein Name
E3 ubiquitin-protein ligase RNF38
Expression levels of RNF38[ENSG00000137075.13]
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