EnhancerDB
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Enhancers that regulate SLTM[ENSG00000137776.12]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr15 59124225 59128415 enh3621 59225852 97437
Bone Marrow (K562) Blood (Karpas-422)
chr15 59138361 59138756 vista20136 59225852 87096
VISTA
chr15 59144484 59144794 vista20137 59225852 81058
VISTA
chr15 59158498 59158653 vista20138 59225852 67199
VISTA
chr15 59163526 59170955 enh16183 59225852 54897
Placenta Bone (Osteoblast) Prostate (RWPE1) Epithelial (MCF-7)
chr15 59194300 59194605 vista20139 59225852 31247
VISTA
chr15 59196525 59203355 enh96589 59225852 22497
Blood (T-cell) Epithelial (MCF-7)
chr15 59207905 59212755 enh16184 59225852 13097
Placenta
chr15 59212925 59220495 enh60547 59225852 5357
Muscle (A673) Neural Stem Cells (H9) Blood (OCI-LY7) Stomach
chr15 59226674 59226915 vista20140 59225852 822
VISTA
chr15 59237505 59241655 enh81006 59225852 11653
Prostate (PC-3)
chr15 59241705 59247275 enh16185 59225852 15853
Skin (Keratinocyte) Prostate (PC-3) Esophagus Stomach Placenta Lung (PC-9) Breast Uterus Epithelial (MCF-7)
chr15 59247645 59251795 enh96590 59225852 21793
Epithelial (MCF-7)
chr15 59252425 59257655 enh16186 59225852 26573
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Placenta Lung (PC-9) Stomach
chr15 59265385 59276343 enh3622 59225852 39533
Prostate (RWPE1) Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (Karpas-422) Blood (T-cell) Stomach
chr15 59285000 59290115 enh75666 59225852 59148
Muscle (A673) Brain (SK-N-SH)
chr15 59303765 59311955 enh75667 59225852 77913
Muscle (A673) Cervix (HeLa-S3)
Transcript facotrs that regulate SLTM[ENSG00000137776.12]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr15 59226076 59226732 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 59225852 224 108141336
chr15 59226183 59226687 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 59225852 331 108141337
chr15 59226553 59226949 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 59225852 701 108141338
chr15 59226611 59227021 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 59225852 759 108141339
chr15 59226648 59226968 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 59225852 796 108141340
chr15 59226654 59227030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 59225852 802 108141341
chr15 59226674 59227014 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 59225852 822 108141342
chr15 59226678 59226682 YY1 TRANSFAC yes 59225852 826 70532085
chr15 59226691 59226707 POU4F3 JASPAR yes 59225852 839 70532086
chr15 59226693 59226707 POU4F1 JASPAR yes 59225852 841 70532087
chr15 59226694 59226708 POU4F1 JASPAR yes 59225852 842 70532088
chr15 59226694 59226710 POU4F3 JASPAR yes 59225852 842 70532089
chr15 59226697 59226712 HNF1A JASPAR yes 59225852 845 70532090
chr15 59226698 59226711 HNF1B JASPAR yes 59225852 846 70532091
chr15 59226704 59226708 YY1 TRANSFAC yes 59225852 852 70532092
chr15 59226705 59226720 HNF4A JASPAR yes 59225852 853 70532093
chr15 59226707 59227037 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 59225852 855 108141343
chr15 59226743 59226747 TEAD2 TRANSFAC yes 59225852 891 70532094
chr15 59226743 59226748 TBP TRANSFAC yes 59225852 891 70532095
chr15 59226743 59226749 TMF TRANSFAC yes 59225852 891 70532096
chr15 59226745 59226755 TEAD1 JASPAR yes 59225852 893 70532097
chr15 59226745 59226755 TEAD4 JASPAR yes 59225852 893 70532098
chr15 59226753 59226773 PPARG JASPAR yes 59225852 901 70532099
chr15 59226770 59226780 ESX1 JASPAR yes 59225852 918 70532100
chr15 59226771 59226779 BARX1 JASPAR yes 59225852 919 70532101
chr15 59226776 59226779 MYB TRANSFAC yes 59225852 924 70532102
chr15 59226786 59226799 ELF3 JASPAR yes 59225852 934 70532103
chr15 59226787 59226791 YY1 TRANSFAC yes 59225852 935 70532104
chr15 59226787 59226798 ELF5 JASPAR yes 59225852 935 70532105
chr15 59226787 59226799 EHF JASPAR yes 59225852 935 70532106
chr15 59226787 59226799 ELF1 JASPAR yes 59225852 935 70532107
chr15 59226787 59226799 ELF4 JASPAR yes 59225852 935 70532108
chr15 59226787 59226800 ELF1 JASPAR yes 59225852 935 70532109
chr15 59226788 59226796 FEV JASPAR yes 59225852 936 70532110
chr15 59226796 59226806 HOXD11 JASPAR yes 59225852 944 70532111
chr15 59226796 59226807 HOXC11 JASPAR yes 59225852 944 70532112
chr15 59226796 59226807 HOXC12 JASPAR yes 59225852 944 70532113
chr15 59226816 59226830 JUN JASPAR yes 59225852 964 70532114
chr15 59226816 59226834 ESR1 JASPAR yes 59225852 964 70532115
chr15 59226818 59226829 BATF JASPAR yes 59225852 966 70532116
chr15 59226820 59226831 FOS JASPAR yes 59225852 968 70532117
chr15 59226820 59226831 FOSL1 JASPAR yes 59225852 968 70532118
chr15 59226820 59226831 JUND JASPAR yes 59225852 968 70532119
chr15 59226821 59226832 FOSL2 JASPAR yes 59225852 969 70532120
chr15 59226821 59226832 JUNB JASPAR yes 59225852 969 70532121
chr15 59226821 59226835 JUN JASPAR yes 59225852 969 70532122
chr15 59226821 59226835 RORA JASPAR yes 59225852 969 70532123
chr15 59226832 59226847 STAT2 JASPAR yes 59225852 980 70532124
chr15 59226839 59226857 NFYA JASPAR yes 59225852 987 70532125
chr15 59226842 59226858 NFYA JASPAR yes 59225852 990 70532126
chr15 59226845 59226858 DUXA JASPAR yes 59225852 993 70532127
chr15 59226845 59226860 NFYB JASPAR yes 59225852 993 70532128
chr15 59226846 59226857 DUX4 JASPAR yes 59225852 994 70532129
chr15 59226847 59226852 NFY TRANSFAC yes 59225852 995 70532130
chr15 59226857 59226871 SPI1 JASPAR yes 59225852 1005 70532131
chr15 59226857 59226871 SPIC JASPAR yes 59225852 1005 70532132
chr15 59226861 59226871 GABPA JASPAR yes 59225852 1009 70532133
chr15 59226862 59226867 ETS2 TRANSFAC yes 59225852 1010 70532134
chr15 59226866 59226882 SOX8 JASPAR yes 59225852 1014 70532135
chr15 59226875 59226879 YY1 TRANSFAC yes 59225852 1023 70532136
chr15 59226878 59226882 TEAD2 TRANSFAC yes 59225852 1026 70532137
chr15 59226878 59226883 TBP TRANSFAC yes 59225852 1026 70532138
chr15 59226878 59226884 TFIID TRANSFAC yes 59225852 1026 70532139
chr15 59226895 59226899 YY1 TRANSFAC yes 59225852 1043 70532140
SNPs associated with SLTM[ENSG00000137776.12], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr15 58641760 rs149751586 A G 529484 Esophagus 0.329299 3985819
chr15 59981647 rs6151432 A G 755795 Esophagus 0.210693 3995262
chr15 58762956 rs12905461 A G 408288 Heart 0.0702525 3987304
chr15 58992925 rs7163515 A C 178319 Heart 0.257782 3988798
chr15 59455272 rs55654146 C T 229420 Pancreas 0.234298 3990917
chr15 58747683 rs117866075 G T 423561 Spleen 0.0605387 3987075
chr15 59294947 rs60533405 T C 69095 Lung 0.315714 3990535
chr15 59251507 rs12916216 T A 25655 Stomach 0.111915 3990247
Details of SLTM[ENSG00000137776.12]
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Genomic Location chr15:59171244-59225852[-]
TSS 59225852
Gene Name SLTM
Ensembl ID ENSG00000137776.12
ENTREZID 79811
Uniprot
A0A024R5U7
Q9NWH9
Protein Name
isoform CRA_a
isoform CRA_b
transcription modulator
transcription modulator
SAFB-like
SAFB-like
SAFB-like transcription modulator
Expression levels of SLTM[ENSG00000137776.12]
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