EnhancerDB
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Enhancers that regulate CDR2[ENSG00000140743.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 22349127 22349159 vista22136 22448486 99327
VISTA
chr16 22362158 22374975 enh31731 22448486 73511
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Stomach
chr16 22366801 22367164 vista22137 22448486 81322
VISTA
chr16 22376349 22385515 enh3941 22448486 62971
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Lung (PC-9) Esophagus Lung Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Thymus Stomach
chr16 22390685 22395035 enh47934 22448486 53451
Thymus Blood (T-cell)
chr16 22396315 22401875 enh31732 22448486 46611
Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Spleen Uterus
chr16 22406708 22421135 enh3942 22448486 27351
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Breast Muscle (Myotube)
chr16 22406960 22407340 vista22138 22448486 41146
VISTA
chr16 22421466 22421891 vista22139 22448486 26595
VISTA
chr16 22432961 22433094 vista22140 22448486 15392
VISTA
chr16 22433545 22438817 enh88225 22448486 9669
Pancreas Uterus Bone (Osteoblast)
Transcript facotrs that regulate CDR2[ENSG00000140743.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with CDR2[ENSG00000140743.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 22366166 rs116898881 G C 0 Esophagus 0.190914 4371230
chr16 21833670 rs144790598 G A 523587 Esophagus 0.0331259 4369884
chr16 21519555 rs71374877 C T 837702 Esophagus 0.0803266 4368673
chr16 22824732 rs1532780 G A,C 376246 Heart 0.248465 4372881
chr16 21833670 rs144790598 G A 523587 Pancreas 0.0122424 4369884
chr16 21778920 rs58104649 C T 578337 Thyroid 0.117816 4369799
chr16 21833670 rs144790598 G A 523587 Lung 0.0169457 4369884
chr16 21955364 rs62047160 T C 401893 Stomach 0.0909194 4369975
Details of CDR2[ENSG00000140743.3]
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Genomic Location chr16:22357257-22448486[-]
TSS 22448486
Gene Name CDR2
Ensembl ID ENSG00000140743.3
ENTREZID 1039
Uniprot
Q01850
Protein Name
Cerebellar degeneration-related protein 2
Expression levels of CDR2[ENSG00000140743.3]
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