EnhancerDB
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Enhancers that regulate RHBDL3[ENSG00000141314.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 30521062 30525819 enh86242 30593195 67376
Colon (HCT116)
chr17 30581125 30585275 enh88285 30593195 7920
Pancreas
chr17 30588630 30588823 vista24424 30593195 4372
VISTA
chr17 30593810 30594211 vista24425 30593195 615
VISTA
chr17 30598182 30610597 enh44410 30593195 4987
Bone Marrow (K562) Brain (SK-N-SH) Lung (A549) Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus
chr17 30602097 30602417 vista24426 30593195 8902
VISTA
chr17 30603137 30603481 vista24427 30593195 9942
VISTA
chr17 30627141 30632144 enh69257 30593195 33946
Liver (HepG2) Neural Stem Cells (H9)
chr17 30633368 30640856 enh60665 30593195 40173
Uterus Blood (OCI-LY7)
chr17 30671045 30675195 enh91145 30593195 77850
Bone Marrow (K562)
Transcript facotrs that regulate RHBDL3[ENSG00000141314.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 30588279 30588855 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 30593195 4340 108249884
chr17 30588289 30588765 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 30593195 4430 108249885
chr17 30588348 30589839 ZNF274 GTRD no Liver (HepG2) 30593195 3356 108249886
chr17 30588416 30590030 ZNF274 GTRD no Liver (HepG2) 30593195 3165 108249887
chr17 30588592 30589919 ZNF274 GTRD no Liver (HepG2) 30593195 3276 108249888
chr17 30588618 30589863 ZNF274 GTRD no Liver (HepG2) 30593195 3332 108249889
chr17 30588627 30589919 ZNF274 GTRD no Liver (HepG2) 30593195 3276 108249890
chr17 30588637 30588648 STAT1 JASPAR yes 30593195 4547 21219675
chr17 30588637 30588648 STAT3 JASPAR yes 30593195 4547 21219676
chr17 30588643 30589870 ZNF274 GTRD no Liver (HepG2) 30593195 3325 108249891
chr17 30588652 30588665 SCRT2 JASPAR yes 30593195 4530 21219677
chr17 30588652 30588667 SCRT1 JASPAR yes 30593195 4528 21219678
chr17 30588656 30588665 SNAI2 JASPAR yes 30593195 4530 21219679
chr17 30588656 30588666 FIGLA JASPAR yes 30593195 4529 21219680
chr17 30588656 30588666 TCF3 JASPAR yes 30593195 4529 21219681
chr17 30588656 30588666 TCF4 JASPAR yes 30593195 4529 21219682
chr17 30588658 30588667 ZEB1 JASPAR yes 30593195 4528 21219683
chr17 30588660 30588665 SP1 TRANSFAC yes 30593195 4530 21219684
chr17 30588662 30588667 TFAP2A TRANSFAC yes 30593195 4528 21219685
chr17 30588662 30588668 MZF1 JASPAR yes 30593195 4527 21219686
chr17 30588663 30588673 SP1 JASPAR yes 30593195 4522 21219687
chr17 30588664 30588679 ESR2 JASPAR yes 30593195 4516 21219688
chr17 30588664 30588684 ESR1 JASPAR yes 30593195 4511 21219689
chr17 30588670 30588687 RARA JASPAR yes 30593195 4508 21219690
chr17 30588676 30589807 ZNF274 GTRD no Liver (HepG2) 30593195 3388 108249892
chr17 30588677 30589711 ZNF274 GTRD no Liver (HepG2) 30593195 3484 108249893
chr17 30588678 30588689 ESRRA JASPAR yes 30593195 4506 21219691
chr17 30588678 30588689 ESRRB JASPAR yes 30593195 4506 21219692
chr17 30588680 30588688 NR4A2 JASPAR yes 30593195 4507 21219693
chr17 30588681 30588698 RARA JASPAR yes 30593195 4497 21219694
chr17 30588681 30589582 ZNF274 GTRD no Liver (HepG2) 30593195 3613 108249894
chr17 30588682 30588686 ESR1 TRANSFAC yes 30593195 4509 21219695
chr17 30588682 30589868 ZNF274 GTRD no Liver (HepG2) 30593195 3327 108249895
chr17 30588684 30589982 ZNF274 GTRD no Liver (HepG2) 30593195 3213 108249896
chr17 30588701 30589357 ZNF274 GTRD no Liver (HepG2) 30593195 3838 108249897
chr17 30588710 30589889 ZNF274 GTRD no Liver (HepG2) 30593195 3306 108249898
chr17 30588716 30589404 ZNF274 GTRD no Liver (HepG2) 30593195 3791 108249899
chr17 30588718 30589837 ZNF274 GTRD no Liver (HepG2) 30593195 3358 108249900
chr17 30588721 30589718 ZNF274 GTRD no Liver (HepG2) 30593195 3477 108249901
chr17 30588730 30589796 ZNF274 GTRD no Liver (HepG2) 30593195 3399 108249902
chr17 30588738 30589825 ZNF274 GTRD no Liver (HepG2) 30593195 3370 108249903
chr17 30588749 30588767 ESR2 JASPAR yes 30593195 4428 21219696
chr17 30588751 30588766 ESR2 JASPAR yes 30593195 4429 21219697
chr17 30588752 30589199 ZNF274 GTRD no Bone Marrow (K562) 30593195 3996 108249904
chr17 30588756 30589496 ZNF274 GTRD no Liver (HepG2) 30593195 3699 108249905
chr17 30588764 30589315 ZNF274 GTRD no Liver (HepG2) 30593195 3880 108249906
chr17 30588764 30589928 ZNF274 GTRD no Liver (HepG2) 30593195 3267 108249907
chr17 30588768 30589321 ZNF274 GTRD no Liver (HepG2) 30593195 3874 108249908
chr17 30588774 30589418 ZNF274 GTRD no Liver (HepG2) 30593195 3777 108249909
chr17 30588778 30589335 ZNF274 GTRD no Liver (HepG2) 30593195 3860 108249910
chr17 30588778 30589407 ZNF274 GTRD no Liver (HepG2) 30593195 3788 108249911
chr17 30588781 30589806 ZNF274 GTRD no Liver (HepG2) 30593195 3389 108249912
chr17 30588786 30589417 ZNF274 GTRD no Bone Marrow (K562) 30593195 3778 108249913
chr17 30588787 30589767 ZNF274 GTRD no Liver (HepG2) 30593195 3428 108249914
chr17 30588790 30589466 ZNF274 GTRD no Liver (HepG2) 30593195 3729 108249915
chr17 30588797 30588811 PLAG1 JASPAR yes 30593195 4384 21219698
chr17 30588798 30589850 ZNF274 GTRD no Liver (HepG2) 30593195 3345 108249916
chr17 30588806 30588821 ZIC3 JASPAR yes 30593195 4374 21219699
chr17 30588806 30588821 ZIC4 JASPAR yes 30593195 4374 21219700
chr17 30588817 30588821 LFA1 TRANSFAC yes 30593195 4374 21219701
chr17 30593002 30594511 EZH2 UCSC Txn Factor no Conserved 30593195 193 108249917
chr17 30593318 30593838 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 30593195 123 108249918
chr17 30593379 30594049 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 30593195 184 108249919
chr17 30593461 30594077 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 30593195 266 108249920
chr17 30593555 30593899 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 30593195 360 108249921
chr17 30593560 30594160 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 30593195 365 108249922
chr17 30593697 30594017 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 30593195 502 108249923
chr17 30593812 30593817 MYB TRANSFAC yes 30593195 617 21219702
chr17 30593830 30593836 SP1 TRANSFAC yes 30593195 635 21219703
chr17 30593830 30593840 SP1 JASPAR yes 30593195 635 21219704
chr17 30593832 30593847 NR2C2 JASPAR yes 30593195 637 21219705
chr17 30593835 30593848 NR2F1 JASPAR yes 30593195 640 21219706
chr17 30593850 30593871 ZNF263 JASPAR yes 30593195 655 21219707
chr17 30593881 30593887 TCF4 TRANSFAC yes 30593195 686 21219708
chr17 30593907 30594503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 30593195 712 108249924
chr17 30593923 30593943 ESR1 JASPAR yes 30593195 728 21219709
chr17 30593924 30594334 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 30593195 729 108249925
chr17 30593928 30593948 ESR1 JASPAR yes 30593195 733 21219710
chr17 30593935 30593939 H4TF2 TRANSFAC yes 30593195 740 21219711
chr17 30593936 30593947 EBF1 JASPAR yes 30593195 741 21219712
chr17 30593950 30593961 E2F6 JASPAR yes 30593195 755 21219713
chr17 30593952 30593960 SP1 TRANSFAC yes 30593195 757 21219714
chr17 30593952 30593962 SP1 JASPAR yes 30593195 757 21219715
chr17 30593954 30593960 MAZ TRANSFAC yes 30593195 759 21219716
chr17 30593957 30593970 NFKB1 JASPAR yes 30593195 762 21219717
chr17 30593957 30593970 NFKB2 JASPAR yes 30593195 762 21219718
chr17 30593958 30593968 NFKB1 JASPAR yes 30593195 763 21219719
chr17 30593958 30593969 NFKB1 JASPAR yes 30593195 763 21219720
chr17 30593961 30593976 TFAP2A JASPAR yes 30593195 766 21219721
chr17 30593961 30593976 TFAP2C JASPAR yes 30593195 766 21219722
chr17 30593962 30593968 NFE2 TRANSFAC yes 30593195 767 21219723
chr17 30593963 30593976 TFAP2A JASPAR yes 30593195 768 21219724
chr17 30593963 30593976 TFAP2B JASPAR yes 30593195 768 21219725
chr17 30593963 30593976 TFAP2C JASPAR yes 30593195 768 21219726
chr17 30593963 30593978 TFAP2A JASPAR yes 30593195 768 21219727
chr17 30593963 30593978 TFAP2C JASPAR yes 30593195 768 21219728
chr17 30593969 30593982 NFKB2 JASPAR yes 30593195 774 21219729
chr17 30593970 30593981 NFKB1 JASPAR yes 30593195 775 21219730
chr17 30593971 30594813 ZNF274 GTRD no Liver (HepG2) 30593195 776 108249926
chr17 30593974 30593985 E2F4 JASPAR yes 30593195 779 21219731
chr17 30593977 30593983 SP1 TRANSFAC yes 30593195 782 21219732
chr17 30593977 30593996 CTCF JASPAR yes 30593195 782 21219733
chr17 30593978 30594310 ZNF274 GTRD no Liver (HepG2) 30593195 783 108249927
chr17 30593994 30594324 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 30593195 799 108249928
chr17 30594011 30594015 H4TF2 TRANSFAC yes 30593195 816 21219734
chr17 30594024 30595019 ZNF274 GTRD no Liver (HepG2) 30593195 829 108249929
chr17 30594034 30594049 RFX5 JASPAR yes 30593195 839 21219735
chr17 30594036 30594398 ZNF274 GTRD no Liver (HepG2) 30593195 841 108249930
chr17 30594061 30594064 MYB TRANSFAC yes 30593195 866 21219736
chr17 30594073 30594358 RUNX3 UCSC Txn Factor no Conserved 30593195 878 108249931
chr17 30594073 30594358 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 30593195 878 108249932
chr17 30594075 30594078 MYB TRANSFAC yes 30593195 880 21219737
chr17 30594077 30594097 TBX19 JASPAR yes 30593195 882 21219738
chr17 30594082 30594286 ZNF274 GTRD no Liver (HepG2) 30593195 887 108249933
chr17 30594086 30594097 TBX20 JASPAR yes 30593195 891 21219739
chr17 30594089 30594106 RXRA JASPAR yes 30593195 894 21219740
chr17 30594101 30594105 LFA1 TRANSFAC yes 30593195 906 21219741
chr17 30594109 30594119 SP1 JASPAR yes 30593195 914 21219742
chr17 30594113 30594134 ZNF263 JASPAR yes 30593195 918 21219743
chr17 30594115 30594125 SP1 JASPAR yes 30593195 920 21219744
chr17 30594123 30594252 SPI1 UCSC Txn Factor no Conserved 30593195 928 108249934
chr17 30594123 30594252 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 30593195 928 108249935
chr17 30594125 30594140 TFAP2C JASPAR yes 30593195 930 21219745
chr17 30594136 30594141 SP1 TRANSFAC yes 30593195 941 21219746
chr17 30594138 30594143 TFAP2A TRANSFAC yes 30593195 943 21219747
chr17 30594138 30594144 MZF1 JASPAR yes 30593195 943 21219748
chr17 30594140 30594155 STAT2 JASPAR yes 30593195 945 21219749
chr17 30594142 30594163 IRF1 JASPAR yes 30593195 947 21219750
chr17 30594144 30594159 IRF9 JASPAR yes 30593195 949 21219751
chr17 30594146 30594160 STAT1 JASPAR yes 30593195 951 21219752
chr17 30594146 30594161 PRDM1 JASPAR yes 30593195 951 21219753
chr17 30594146 30594161 STAT2 JASPAR yes 30593195 951 21219754
chr17 30594146 30594164 IRF2 JASPAR yes 30593195 951 21219755
chr17 30594147 30594159 IRF1 JASPAR yes 30593195 952 21219756
chr17 30594149 30595118 ZNF274 GTRD no Liver (HepG2) 30593195 954 108249936
chr17 30594162 30594182 RREB1 JASPAR yes 30593195 967 21219757
chr17 30594163 30594183 RREB1 JASPAR yes 30593195 968 21219758
chr17 30594166 30594181 RUNX2 JASPAR yes 30593195 971 21219759
chr17 30594167 30594187 RREB1 JASPAR yes 30593195 972 21219760
chr17 30594167 30594689 ZNF274 GTRD no Liver (HepG2) 30593195 972 108249937
chr17 30594181 30594192 E2F4 JASPAR yes 30593195 986 21219761
chr17 30594181 30594192 E2F6 JASPAR yes 30593195 986 21219762
chr17 30594183 30594191 E2F1 JASPAR yes 30593195 988 21219763
SNPs associated with RHBDL3[ENSG00000141314.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 30610542 rs113926553 C T 0 Esophagus 0.0166016 4830465
chr17 30604478 rs71377424 C T 0 Esophagus 0.0674928 4830367
chr17 30607423 rs9908969 T C 0 Esophagus 0.00164532 4830399
chr17 30604478 rs71377424 C T 0 Heart 1.84968e-11 4830367
chr17 30599853 rs12942042 G A,T 0 Pancreas 8.90714e-11 4830294
chr17 30604478 rs71377424 C T 0 Breast 0.127874 4830367
chr17 30604478 rs71377424 C T 0 Uterus 0.190272 4830367
chr17 30593336 rs9889253 C A,T 0 Thyroid 4.13424e-15 4830240
chr17 29785921 rs9889731 G A 807274 Lung 0.23799 4825652
chr17 29766182 rs144054982 C T 827013 Stomach 0.255819 4825409
chr17 30587802 rs1964662 G C 5393 Adrenal 6.52725e-05 4830211
Details of RHBDL3[ENSG00000141314.8]
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Genomic Location chr17:30593195-30651680[+]
TSS 30593195
Gene Name RHBDL3
Ensembl ID ENSG00000141314.8
ENTREZID 162494
Uniprot
P58872
Protein Name
Rhomboid-like protein
Rhomboid-related protein 3
Expression levels of RHBDL3[ENSG00000141314.8]
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