EnhancerDB
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Enhancers that regulate TBCD[ENSG00000141556.16]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr17 80624406 80647687 enh44509 80709940 62253
Skin (Keratinocyte) Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Ovary Lung Blood (OCI-LY7) Lung (A549) Stomach Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr17 80655375 80655626 vista26475 80709940 54314
VISTA
chr17 80663772 80669443 enh17454 80709940 40497
Prostate (RWPE1) Esophagus Blood (OCI-LY7) Placenta Muscle (Myoblast) Muscle (Myotube) Stomach
chr17 80700705 80704855 enh17455 80709940 5085
Placenta
chr17 80712796 80713169 vista26476 80709940 2856
VISTA
chr17 80730945 80736875 enh60694 80709940 21005
Muscle (A673) Ovary Blood (T-cell) Blood (OCI-LY7)
chr17 80738805 80755315 enh32383 80709940 28865
Prostate (PC-3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Peripheral Blood (MM.1S) Muscle (Myoblast) Breast Muscle (Myotube) Uterus Stomach
chr17 80745153 80745621 vista26477 80709940 35213
VISTA
chr17 80747083 80747366 vista26478 80709940 37143
VISTA
chr17 80762616 80763036 vista26479 80709940 52676
VISTA
chr17 80774945 80783195 enh92761 80709940 65005
Liver (HepG2) Epithelial (MCF-7)
chr17 80791645 80797394 enh17456 80709940 81705
Liver (HepG2) Brain (SK-N-SH) Muscle (A673) Placenta Uterus Breast Muscle (Myotube) Neural Stem Cells (H9) Stomach
chr17 80794045 80794420 vista26480 80709940 84105
VISTA
chr17 80796209 80796714 vista26481 80709940 86269
VISTA
chr17 80801085 80809600 enh17457 80709940 91145
Large Intestine Blood (T-cell) Blood (GM12878) Placenta Uterus Thymus Epithelial (MCF-7)
chr17 80805995 80806457 vista26482 80709940 96055
VISTA
Transcript facotrs that regulate TBCD[ENSG00000141556.16]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr17 80712502 80713193 ZBTB33 GTRD no Brain (SK-N-SH) 80709940 2562 108312741
chr17 80712550 80712912 ZNF274 GTRD no Bone Marrow (K562) 80709940 2610 108312742
chr17 80712563 80712887 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 80709940 2623 108312743
chr17 80712575 80713015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2635 108312744
chr17 80712576 80713222 P63 GTRD no Skin (Keratinocyte) 80709940 2636 108312745
chr17 80712608 80713020 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2668 108312746
chr17 80712624 80713044 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2684 108312747
chr17 80712637 80712967 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 80709940 2697 108312748
chr17 80712654 80713030 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 80709940 2714 108312749
chr17 80712689 80712999 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2749 108312750
chr17 80712726 80713086 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2786 108312751
chr17 80712750 80712883 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2810 108312752
chr17 80712785 80712964 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2845 108312753
chr17 80712786 80712895 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 80709940 2846 108312754
chr17 80712799 80713119 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2859 108312755
chr17 80712800 80712808 SP1 TRANSFAC yes 80709940 2860 21322762
chr17 80712816 80712834 RARA JASPAR yes 80709940 2876 21322763
chr17 80712820 80713040 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 80709940 2880 108312756
chr17 80712820 80713120 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2880 108312757
chr17 80712822 80713212 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 80709940 2882 108312758
chr17 80712824 80712836 MYBL1 JASPAR yes 80709940 2884 21322764
chr17 80712834 80713608 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2894 108312759
chr17 80712837 80712850 TFAP2A JASPAR yes 80709940 2897 21322765
chr17 80712837 80712850 TFAP2B JASPAR yes 80709940 2897 21322766
chr17 80712837 80712850 TFAP2C JASPAR yes 80709940 2897 21322767
chr17 80712844 80713264 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2904 108312760
chr17 80712854 80713671 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2914 108312761
chr17 80712855 80712868 NR2F1 JASPAR yes 80709940 2915 21322768
chr17 80712855 80712875 PPARG JASPAR yes 80709940 2915 21322769
chr17 80712857 80712865 NR4A2 JASPAR yes 80709940 2917 21322770
chr17 80712859 80712863 ESR1 TRANSFAC yes 80709940 2919 21322771
chr17 80712859 80712869 MAX JASPAR yes 80709940 2919 21322772
chr17 80712859 80712870 USF1 JASPAR yes 80709940 2919 21322773
chr17 80712859 80712870 USF2 JASPAR yes 80709940 2919 21322774
chr17 80712867 80712878 EBF1 JASPAR yes 80709940 2927 21322775
chr17 80712868 80712874 MZF1 JASPAR yes 80709940 2928 21322776
chr17 80712873 80712878 ETS2 TRANSFAC yes 80709940 2933 21322777
chr17 80712873 80712881 FEV JASPAR yes 80709940 2933 21322778
chr17 80712874 80712881 SPI1 JASPAR yes 80709940 2934 21322779
chr17 80712874 80713520 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2934 108312762
chr17 80712893 80713576 ZNF143 GTRD no Epithelial (MCF-7) 80709940 2953 108312763
chr17 80712895 80713219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 2955 108312764
chr17 80712917 80712926 JDP2 JASPAR yes 80709940 2977 21322780
chr17 80712922 80712934 PBX1 JASPAR yes 80709940 2982 21322781
chr17 80712923 80712937 ONECUT1 JASPAR yes 80709940 2983 21322782
chr17 80712923 80712937 ONECUT2 JASPAR yes 80709940 2983 21322783
chr17 80712923 80712937 ONECUT3 JASPAR yes 80709940 2983 21322784
chr17 80712923 80712938 HNF1A JASPAR yes 80709940 2983 21322785
chr17 80712926 80712936 CUX1 JASPAR yes 80709940 2986 21322786
chr17 80712933 80713097 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 80709940 2993 108312765
chr17 80712939 80712955 SOX8 JASPAR yes 80709940 2999 21322787
chr17 80712962 80712967 ETS2 TRANSFAC yes 80709940 3022 21322788
chr17 80712966 80712971 SP1 TRANSFAC yes 80709940 3026 21322789
chr17 80712967 80712972 SP1 TRANSFAC yes 80709940 3027 21322790
chr17 80712978 80712993 NR2C2 JASPAR yes 80709940 3038 21322791
chr17 80712980 80712991 E2F6 JASPAR yes 80709940 3040 21322792
chr17 80712981 80712986 SP1 TRANSFAC yes 80709940 3041 21322793
chr17 80712984 80712990 MAZ TRANSFAC yes 80709940 3044 21322794
chr17 80712985 80713065 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 80709940 3045 108312766
chr17 80712997 80713001 LFA1 TRANSFAC yes 80709940 3057 21322795
chr17 80713005 80713011 ZNF354C JASPAR yes 80709940 3065 21322796
chr17 80713016 80713020 YY1 TRANSFAC yes 80709940 3076 21322797
chr17 80713020 80713040 RREB1 JASPAR yes 80709940 3080 21322798
chr17 80713023 80713041 NFYA JASPAR yes 80709940 3083 21322799
chr17 80713024 80713029 NFY TRANSFAC yes 80709940 3084 21322800
chr17 80713026 80713042 NFYA JASPAR yes 80709940 3086 21322801
chr17 80713027 80713492 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3087 108312767
chr17 80713029 80713044 NFYB JASPAR yes 80709940 3089 21322802
chr17 80713031 80713036 NFY TRANSFAC yes 80709940 3091 21322803
chr17 80713041 80713055 GATA2 JASPAR yes 80709940 3101 21322804
chr17 80713045 80713053 GATA3 JASPAR yes 80709940 3105 21322805
chr17 80713061 80713078 BCL6B JASPAR yes 80709940 3121 21322806
chr17 80713063 80713079 SRF JASPAR yes 80709940 3123 21322807
chr17 80713070 80713732 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3130 108312768
chr17 80713109 80713515 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3169 108312769
chr17 80713117 80713129 POU2F1 JASPAR yes 80709940 3177 21322808
chr17 80713117 80713130 POU3F3 JASPAR yes 80709940 3177 21322809
chr17 80713117 80713131 POU1F1 JASPAR yes 80709940 3177 21322810
chr17 80713118 80713130 POU3F1 JASPAR yes 80709940 3178 21322811
chr17 80713118 80713130 POU3F2 JASPAR yes 80709940 3178 21322812
chr17 80713119 80713128 POU3F4 JASPAR yes 80709940 3179 21322813
chr17 80713119 80713128 POU5F1B JASPAR yes 80709940 3179 21322814
chr17 80713124 80713531 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3184 108312770
chr17 80713128 80713141 HSF1 JASPAR yes 80709940 3188 21322815
chr17 80713128 80713141 HSF4 JASPAR yes 80709940 3188 21322816
chr17 80713130 80713524 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3190 108312771
chr17 80713140 80713678 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3200 108312772
chr17 80713143 80713509 ZNF143 GTRD no Epithelial (MCF-7) 80709940 3203 108312773
SNPs associated with TBCD[ENSG00000141556.16], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr17 80838588 rs8067926 A G 0 Pancreas 1.91723e-08 5125827
chr17 80804285 rs12945348 G A 0 Breast 0.00274073 5125244
chr17 80777916 rs4789718 G A 0 Spleen 0.00362151 5124957
chr17 80553085 rs4789805 G A 156855 Uterus 0.26408 5123453
chr17 80343302 rs62079517 G A 366638 Liver 0.153288 5121693
chr17 80667292 rs116863991 C T 42648 Lung 2.02323e-05 5124266
chr17 80777916 rs4789718 G A 0 Adrenal 7.70786e-06 5124957
Details of TBCD[ENSG00000141556.16]
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Genomic Location chr17:80709940-80900724[+]
TSS 80709940
Gene Name TBCD
Ensembl ID ENSG00000141556.16
ENTREZID 6904
Uniprot
Q9BTW9
Protein Name
TBCD protein
Tubulin folding cofactor D
Tubulin-specific chaperone D
Expression levels of TBCD[ENSG00000141556.16]
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