EnhancerDB

Enhancers that regulate RORC[ENSG00000143365.12]

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Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears	More
chr1	151703705	151709775	enh95905	151804348	94573	Epithelial (MCF-7)
chr1	151710145	151714715	enh12256	151804348	89633	Esophagus Placenta Epithelial (MCF-7)
chr1	151726885	151731035	enh110657	151804348	73313	Cervix (HeLa-S3)
chr1	151789671	151798076	enh61901	151804348	6272	Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Bone (Osteoblast) Lung (PC-9) Pancreas Blood (T-cell) Stomach
chr1	151792678	151793001	vista3287	151804348	11347	VISTA
chr1	151795693	151795913	vista3288	151804348	8435	VISTA
chr1	151809390	151809745	vista3289	151804348	5042	VISTA
chr1	151831105	151837335	enh12257	151804348	26757	Placenta Epithelial (MCF-7)
chr1	151837805	151846015	enh12258	151804348	33457	Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Placenta Lung (PC-9) Epithelial (MCF-7)
chr1	151856012	151860250	enh79215	151804348	51664	Prostate (PC-3) Prostate (RWPE1) Lung (PC-9)
chr1	151868154	151868386	vista3290	151804348	63806	VISTA
chr1	151868425	151873375	enh47237	151804348	64077	Large Intestine Thymus Lung (PC-9) Blood (T-cell) Stomach
chr1	151871280	151871437	vista3291	151804348	66932	VISTA
chr1	151875545	151880415	enh12259	151804348	71197	Bone Marrow (K562) Large Intestine Placenta Lung (PC-9) Blood (T-cell) Stomach
chr1	151877533	151877895	vista3292	151804348	73185	VISTA
chr1	151885865	151921875	enh624	151804348	81517	Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr1	151892722	151892912	vista3293	151804348	88374	VISTA

Transcript facotrs that regulate RORC[ENSG00000143365.12]

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Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id	More
chr1	151808905	151809421	ZZZ3	ENCODE Uniform TFBS	no	Cervix (HeLa-S3)	151804348	4557	107829576
chr1	151808907	151809437	ZZZ3	ENCODE Uniform TFBS	no	Cervix (HeLa-S3)	151804348	4559	107829577
chr1	151809012	151809692	ZZZ3	ENCODE Uniform TFBS	no	Cervix (HeLa-S3)	151804348	4664	107829578
chr1	151809097	151809601	ZZZ3	ENCODE Uniform TFBS	no	Cervix (HeLa-S3)	151804348	4749	107829579
chr1	151809106	151809416	ZNF274	ENCODE Uniform TFBS	no	Bone Marrow (K562)	151804348	4758	107829580
chr1	151809113	151809643	ZZZ3	ENCODE Uniform TFBS	no	Cervix (HeLa-S3)	151804348	4765	107829581
chr1	151809118	151809634	ZZZ3	ENCODE Uniform TFBS	no	Cervix (HeLa-S3)	151804348	4770	107829582
chr1	151809251	151809635	ZNF217	ENCODE Uniform TFBS	no	Epithelial (MCF-7)	151804348	4903	107829583
chr1	151809346	151809656	ZNF217	ENCODE Uniform TFBS	no	Epithelial (MCF-7)	151804348	4998	107829584

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id	More
chr1	151793174	rs11204894	G	T	0	Esophagus	0.00427742	627031
chr1	151833710	rs61815149	A	T	29362	Esophagus	0.218356	627322
chr1	152475299	rs6587678	G	C	670951	Heart	0.0882863	630609
chr1	151362511	rs6680733	A	G	416036	Heart	0.342637	624960
chr1	152415904	rs79464148	G	T	611556	Pancreas	0.0574901	630248
chr1	151210292	rs75360998	G	A	568255	Breast	0.16629	624409
chr1	151995881	rs11805632	C	A,G	191533	Spleen	0.259932	628868
chr1	152747655	rs72702896	C	T	943307	Ovary	0.236595	631104
chr1	152098428	rs140371183	A	G	294080	Thyroid	0.19211	629418

Genomic Location	chr1:151778547-151804348[-]
TSS	151804348
Gene Name	RORC
Ensembl ID	ENSG00000143365.12
ENTREZID	6097
Uniprot
	Q6I9R9
	P51449
	F1D8P6
Protein Name
	isoform CRA_a
	Nuclear receptor ROR-gamma
	RAR-related orphan receptor C
	RAR-related orphan receptor C