EnhancerDB
  1. Home
  2. Gene
  3. ECM1[ENSG00000143369.10]
Enhancers that regulate ECM1[ENSG00000143369.10]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 150380545 150385815 enh92110 150480538 94723
Liver (HepG2)
chr1 150391445 150397615 enh94046 150480538 82923
Spleen Thyroid Epithelial (MCF-7)
chr1 150400400 150404550 enh67126 150480538 75988
Neural Stem Cells (H9)
chr1 150486785 150492355 enh98525 150480538 6247
Uterus
chr1 150498667 150512910 enh12244 150480538 18129
Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
chr1 150510569 150510713 vista3256 150480538 30031
VISTA
chr1 150538785 150546975 enh614 150480538 58247
Cervix (HeLa-S3) Esophagus Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Heart
chr1 150539630 150541082 vista3257 150480538 59092
VISTA
chr1 150560705 150579950 enh12245 150480538 80167
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 150577042 150577503 vista3258 150480538 96504
VISTA
chr1 150580252 150590495 enh615 150480538 99714
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript facotrs that regulate ECM1[ENSG00000143369.10]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with ECM1[ENSG00000143369.10], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 151362592 rs2479382 C T 876327 Heart 0.106158 624969
chr1 150134895 rs73020860 G A 345643 Pancreas 0.181561 620196
chr1 149954038 rs186339560 C T 526500 Ovary 0.228896 619238
chr1 151324272 rs11204803 C T 838007 Uterus 0.111831 624803
Details of ECM1[ENSG00000143369.10]
Back to top
Genomic Location chr1:150480538-150486265[+]
TSS 150480538
Gene Name ECM1
Ensembl ID ENSG00000143369.10
ENTREZID 1893
Uniprot
A0A140VJI7
Q16610
Protein Name
ECM1 short variant
Extracellular matrix protein 1
Truncated extracellular matrix protein 1
Expression levels of ECM1[ENSG00000143369.10]
Back to top