EnhancerDB
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Enhancers that regulate GOLPH3L[ENSG00000143457.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 150560705 150579950 enh12245 150669630 89680
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 150577042 150577503 vista3258 150669630 92127
VISTA
chr1 150580252 150590495 enh615 150669630 79135
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 150585815 150586394 vista3259 150669630 83236
VISTA
chr1 150592045 150596195 enh12246 150669630 73435
Placenta
chr1 150592182 150592667 vista3260 150669630 76963
VISTA
chr1 150600412 150600701 vista3261 150669630 68929
VISTA
chr1 150611624 150616535 enh67127 150669630 53095
Neural Stem Cells (H9)
chr1 150625245 150629395 enh109351 150669630 40235
Stomach
chr1 150637525 150645975 enh12247 150669630 23655
Prostate (PC-3) Liver (HepG2) Large Intestine Stomach Placenta Pancreas Epithelial (MCF-7)
chr1 150646245 150650395 enh111509 150669630 19235
Brain (SK-N-MC)
chr1 150654285 150658655 enh616 150669630 10975
Blood (T-cell) Blood (Karpas-422)
chr1 150659345 150663495 enh79214 150669630 6135
Prostate (PC-3)
chr1 150668096 150668276 vista3262 150669630 1354
VISTA
chr1 150735950 150736336 vista3263 150669630 66320
VISTA
chr1 150751085 150755235 enh111510 150669630 81455
Brain (SK-N-MC)
chr1 150758385 150764139 enh617 150669630 88755
Esophagus Placenta Blood (Karpas-422)
Transcript facotrs that regulate GOLPH3L[ENSG00000143457.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 150666728 150669320 ZBTB33 GTRD no Lung (A549) 150669630 310 107828698
chr1 150666787 150669541 ZNF143 GTRD no Epithelial (MCF-7) 150669630 89 107828699
chr1 150667081 150668431 ZNF274 GTRD no Liver (HepG2) 150669630 1199 107828700
chr1 150667223 150668415 ZNF274 GTRD no Liver (HepG2) 150669630 1215 107828701
chr1 150667234 150668210 ZNF274 GTRD no Liver (HepG2) 150669630 1420 107828702
chr1 150667247 150668265 ZNF274 GTRD no Liver (HepG2) 150669630 1365 107828703
chr1 150667249 150668402 ZNF274 GTRD no Liver (HepG2) 150669630 1228 107828704
chr1 150667267 150668259 ZNF274 GTRD no Liver (HepG2) 150669630 1371 107828705
chr1 150667299 150668182 ZNF274 GTRD no Liver (HepG2) 150669630 1448 107828706
chr1 150667303 150668274 ZNF274 GTRD no Liver (HepG2) 150669630 1356 107828707
chr1 150667356 150668274 ZNF274 GTRD no Liver (HepG2) 150669630 1356 107828708
chr1 150667380 150668108 ZNF274 GTRD no Liver (HepG2) 150669630 1522 107828709
chr1 150667384 150668155 ZNF274 GTRD no Liver (HepG2) 150669630 1475 107828710
chr1 150667498 150669241 ZNF143 GTRD no Epithelial (MCF-7) 150669630 389 107828711
chr1 150667537 150668386 ZNF274 GTRD no Liver (HepG2) 150669630 1244 107828712
chr1 150667547 150668169 ZNF274 GTRD no Liver (HepG2) 150669630 1461 107828713
chr1 150667551 150669117 ZNF143 GTRD no Epithelial (MCF-7) 150669630 513 107828714
chr1 150667568 150668188 ZNF274 GTRD no Liver (HepG2) 150669630 1442 107828715
chr1 150667623 150668368 ZNF274 GTRD no Liver (HepG2) 150669630 1262 107828716
chr1 150667630 150669537 ZNF143 GTRD no Epithelial (MCF-7) 150669630 93 107828717
chr1 150667638 150669159 ZBTB33 GTRD no Lung (A549) 150669630 471 107828718
chr1 150667641 150669811 ZNF143 GTRD no Epithelial (MCF-7) 150669630 181 107828719
chr1 150667649 150668142 ZNF274 GTRD no Liver (HepG2) 150669630 1488 107828720
chr1 150667652 150668306 ZNF274 GTRD no Liver (HepG2) 150669630 1324 107828721
chr1 150667661 150668260 ZNF274 GTRD no Liver (HepG2) 150669630 1370 107828722
chr1 150667664 150668396 ZNF274 GTRD no Liver (HepG2) 150669630 1234 107828723
chr1 150667666 150668530 ZNF274 GTRD no Liver (HepG2) 150669630 1100 107828724
chr1 150667671 150668106 ZNF274 GTRD no Liver (HepG2) 150669630 1524 107828725
chr1 150667700 150669279 ZNF143 GTRD no Epithelial (MCF-7) 150669630 351 107828726
chr1 150667723 150669241 ZNF143 GTRD no Epithelial (MCF-7) 150669630 389 107828727
chr1 150667732 150668299 ZNF274 GTRD no Liver (HepG2) 150669630 1331 107828728
chr1 150667743 150668226 ZNF274 GTRD no Liver (HepG2) 150669630 1404 107828729
chr1 150667744 150668386 ZNF274 GTRD no Liver (HepG2) 150669630 1244 107828730
chr1 150667751 150669300 ZNF143 GTRD no Epithelial (MCF-7) 150669630 330 107828731
chr1 150667763 150669172 ZNF143 GTRD no Epithelial (MCF-7) 150669630 458 107828732
chr1 150667782 150668140 ZBTB33 GTRD no Lung (A549) 150669630 1490 107828733
chr1 150667787 150668204 ZNF274 GTRD no Liver (HepG2) 150669630 1426 107828734
chr1 150667792 150668393 ZNF274 GTRD no Liver (HepG2) 150669630 1237 107828735
chr1 150667797 150669048 ZBTB33 GTRD no Lung (A549) 150669630 582 107828736
chr1 150667802 150668113 ZBTB33 GTRD no Lung (A549) 150669630 1517 107828737
chr1 150667809 150668321 ZNF143 GTRD no Epithelial (MCF-7) 150669630 1309 107828738
chr1 150667833 150668235 ZNF274 GTRD no Liver (HepG2) 150669630 1395 107828739
chr1 150667859 150668560 ZBTB33 GTRD no Lung (A549) 150669630 1070 107828740
chr1 150667862 150668146 ZNF274 GTRD no Liver (HepG2) 150669630 1484 107828741
chr1 150667910 150668267 ZNF274 GTRD no Cervix (HeLa-S3) 150669630 1363 107828742
chr1 150667925 150668160 ZNF274 GTRD no Cervix (HeLa-S3) 150669630 1470 107828743
chr1 150668065 150668345 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 150669630 1285 107828744
chr1 150668096 150668100 TEAD2 TRANSFAC yes 150669630 1530 118367153
chr1 150668096 150668101 TBP TRANSFAC yes 150669630 1529 118367154
chr1 150668096 150668102 TFIID TRANSFAC yes 150669630 1528 118367155
chr1 150668096 150668111 FOXP1 JASPAR yes 150669630 1519 118367156
chr1 150668098 150668104 TBP TRANSFAC yes 150669630 1526 118367157
chr1 150668099 150668110 FOXP2 JASPAR yes 150669630 1520 118367158
chr1 150668103 150668109 HiNF-A TRANSFAC yes 150669630 1521 118367159
chr1 150668106 150668127 IRF1 JASPAR yes 150669630 1503 118367160
chr1 150668107 150668119 MEF2D JASPAR yes 150669630 1511 118367161
chr1 150668110 150668124 SPIC JASPAR yes 150669630 1506 118367162
chr1 150668110 150668124 STAT1 JASPAR yes 150669630 1506 118367163
chr1 150668110 150668125 PRDM1 JASPAR yes 150669630 1505 118367164
chr1 150668110 150668125 STAT2 JASPAR yes 150669630 1505 118367165
chr1 150668112 150668133 IRF1 JASPAR yes 150669630 1497 118367166
chr1 150668115 150668129 IRF7 JASPAR yes 150669630 1501 118367167
chr1 150668116 150668131 FOXP1 JASPAR yes 150669630 1499 118367168
chr1 150668117 150668129 IRF1 JASPAR yes 150669630 1501 118367169
chr1 150668118 150668139 IRF1 JASPAR yes 150669630 1491 118367170
chr1 150668122 150668128 TBP TRANSFAC yes 150669630 1502 118367171
chr1 150668139 150668151 FOXI1 JASPAR yes 150669630 1479 118367172
chr1 150668159 150669190 ZNF143 GTRD no Epithelial (MCF-7) 150669630 440 107828745
chr1 150668163 150668167 YY1 TRANSFAC yes 150669630 1463 118367173
chr1 150668164 150668172 FEV JASPAR yes 150669630 1458 118367174
chr1 150668166 150668171 ETS2 TRANSFAC yes 150669630 1459 118367175
chr1 150668172 150668189 ZNF410 JASPAR yes 150669630 1441 118367176
chr1 150668178 150668192 JUN JASPAR yes 150669630 1438 118367177
chr1 150668179 150668189 EMX1 JASPAR yes 150669630 1441 118367178
chr1 150668179 150668189 HOXB3 JASPAR yes 150669630 1441 118367179
chr1 150668180 150668191 BATF JASPAR yes 150669630 1439 118367180
chr1 150668181 150668192 FOSL2 JASPAR yes 150669630 1438 118367181
chr1 150668181 150668192 JUNB JASPAR yes 150669630 1438 118367182
chr1 150668182 150668193 FOS JASPAR yes 150669630 1437 118367183
chr1 150668182 150668193 FOSL1 JASPAR yes 150669630 1437 118367184
chr1 150668182 150668193 JUND JASPAR yes 150669630 1437 118367185
chr1 150668182 150668193 NFE2 JASPAR yes 150669630 1437 118367186
chr1 150668183 150668192 JDP2 JASPAR yes 150669630 1438 118367187
chr1 150668183 150668194 FOSL2 JASPAR yes 150669630 1436 118367188
chr1 150668183 150668194 JUNB JASPAR yes 150669630 1436 118367189
chr1 150668183 150668197 JUN JASPAR yes 150669630 1433 118367190
chr1 150668184 150668195 BATF JASPAR yes 150669630 1435 118367191
chr1 150668189 150668193 YY1 TRANSFAC yes 150669630 1437 118367192
chr1 150668216 150669303 ZNF143 GTRD no Epithelial (MCF-7) 150669630 327 107828746
chr1 150668218 150668228 SMAD3 JASPAR yes 150669630 1402 118367193
chr1 150668229 150668232 MYB TRANSFAC yes 150669630 1398 118367194
chr1 150668255 150669077 ZBTB33 GTRD no Lung (A549) 150669630 553 107828747
SNPs associated with GOLPH3L[ENSG00000143457.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 150656307 rs6685702 A G 0 Esophagus 3.41858e-14 622988
chr1 150511099 rs11204660 C G 107602 Pancreas 0.23161 621705
chr1 150129443 rs74124334 C T 489258 Breast 0.170346 620100
chr1 151362656 rs138457898 C A,T 693026 Spleen 0.677299 624976
chr1 151181897 rs187211487 C T 512267 Ovary 0.369267 624351
chr1 150181086 rs4408187 T C 437615 Uterus 0.236947 620632
Details of GOLPH3L[ENSG00000143457.6]
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Genomic Location chr1:150618701-150669630[-]
TSS 150669630
Gene Name GOLPH3L
Ensembl ID ENSG00000143457.6
ENTREZID 55204
Uniprot
Q9H4A5
Protein Name
Golgi phosphoprotein 3-like
Expression levels of GOLPH3L[ENSG00000143457.6]
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