EnhancerDB
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Enhancers that regulate SSRP1[ENSG00000149136.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 57008254 57008590 vista10339 57103351 94761
VISTA
chr11 57014589 57021495 enh62157 57103351 81856
Bone Marrow (K562) Esophagus Lung (PC-9) Pancreas Uterus Stomach
chr11 57028694 57033096 enh67805 57103351 70255
Neural Stem Cells (H9)
chr11 57040485 57066955 enh13935 57103351 36396
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr11 57044676 57044864 vista10340 57103351 58487
VISTA
chr11 57045764 57045851 vista10341 57103351 57500
VISTA
chr11 57069385 57076235 enh79897 57103351 27116
Prostate (PC-3) Liver (HepG2)
chr11 57078741 57085263 enh64471 57103351 18088
Embryonic Stem Cell Line (H1-hESC) Heart
chr11 57083068 57083441 vista10342 57103351 19910
VISTA
chr11 57104113 57104244 vista10343 57103351 762
VISTA
chr11 57109325 57113535 enh74808 57103351 5974
Muscle (A673) Brain (SK-N-MC)
chr11 57118645 57129995 enh43545 57103351 15294
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Pancreas Muscle (Myotube) Neural Stem Cells (H9)
chr11 57138383 57142877 enh64472 57103351 35032
Heart
chr11 57164805 57172685 enh79898 57103351 61454
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Epithelial (MCF-7)
chr11 57173048 57173332 vista10344 57103351 69697
VISTA
chr11 57173815 57174163 vista10345 57103351 70464
VISTA
chr11 57198205 57214175 enh43546 57103351 94854
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Liver Bone (Osteoblast) Stomach Thyroid Lung (PC-9) Breast Muscle (Myotube) Epithelial (MCF-7)
chr11 57199694 57199869 vista10346 57103351 96343
VISTA
chr11 57200214 57200547 vista10347 57103351 96863
VISTA
Transcript facotrs that regulate SSRP1[ENSG00000149136.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr11 57104138 57104149 TBX20 JASPAR yes 57103351 787 114073371
chr11 57104140 57104143 MYB TRANSFAC yes 57103351 789 114073372
chr11 57104164 57104168 NFE TRANSFAC yes 57103351 813 114073373
chr11 57104203 57104215 PKNOX2 JASPAR yes 57103351 852 114073374
chr11 57104225 57104229 YY1 TRANSFAC yes 57103351 874 114073375
SNPs associated with SSRP1[ENSG00000149136.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 56934222 rs2860498 C G,T 159237 Heart 0.258013 2007540
chr11 57208467 rs35677854 C T 105116 Pancreas 0.284185 2009110
chr11 57103350 rs71484443 A G 0 Spleen 0.282583 2008540
chr11 57207447 rs2584859 C T 104096 Uterus 0.309033 2009096
chr11 57044537 rs192812344 C A 48922 Lung 0.0404706 2008057
chr11 56713855 rs139684856 G A 379604 Stomach 0.158026 2006687
Details of SSRP1[ENSG00000149136.3]
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Genomic Location chr11:57093459-57103351[-]
TSS 57103351
Gene Name SSRP1
Ensembl ID ENSG00000149136.3
ENTREZID 6749
Uniprot
Q08945
A0A024R4Z6
Protein Name
Alternative protein SSRP1
FACT complex subunit SSRP1
Expression levels of SSRP1[ENSG00000149136.3]
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