EnhancerDB
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Enhancers that regulate TMEM56[ENSG00000152078.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 95476045 95491597 enh26980 95582894 91297
Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (Myoblast) Pancreas Uterus Stomach
chr1 95484238 95484316 vista2584 95582894 98578
VISTA
chr1 95505245 95512055 enh98501 95582894 70839
Uterus Stomach
chr1 95508067 95508435 vista2585 95582894 74459
VISTA
chr1 95530725 95537175 enh49910 95582894 45719
Pancreas Liver (HepG2) Large Intestine
chr1 95548045 95555113 enh57506 95582894 27781
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Bone (Osteoblast) Lung (A549) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 95548541 95551861 vista95 95582894 31033
VISTA
chr1 95551114 95551338 vista2586 95582894 31556
VISTA
chr1 95559485 95564055 enh79143 95582894 18839
Stomach Prostate (PC-3) Peripheral Blood (MM.1S) Lung (PC-9)
chr1 95590445 95594595 enh49911 95582894 7551
Large Intestine
chr1 95593826 95594157 vista2587 95582894 10932
VISTA
chr1 95600771 95604921 enh67064 95582894 17877
Neural Stem Cells (H9)
chr1 95604801 95605035 vista2588 95582894 21907
VISTA
chr1 95630936 95637603 enh49912 95582894 48042
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Liver Lung (A549) Colon (HCT116) Lung (PC-9) Heart
chr1 95641289 95647415 enh64084 95582894 58395
Bone Marrow (K562) Heart
chr1 95645260 95645496 vista2589 95582894 62366
VISTA
chr1 95647625 95651775 enh109332 95582894 64731
Stomach
chr1 95671225 95677115 enh109333 95582894 88331
Stomach
Transcript facotrs that regulate TMEM56[ENSG00000152078.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with TMEM56[ENSG00000152078.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 95981826 rs12134748 G A 318663 Esophagus 0.107736 502197
chr1 94791198 rs7520677 T C 791696 Esophagus 0.178359 494356
chr1 94584362 rs4147800 C G,T 998532 Breast 0.36887 492777
chr1 95119790 rs10782987 G A 463104 Spleen 0.183365 497105
chr1 95128914 rs115867836 A C 453980 Liver 0.490624 497222
chr1 95834852 rs7518067 G C 171689 Lung 0.000704665 501839
chr1 94788037 rs12069536 G A 794857 Stomach 0.296445 494316
Details of TMEM56[ENSG00000152078.5]
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Genomic Location chr1:95582894-95663163[+]
TSS 95582894
Gene Name TMEM56
Ensembl ID ENSG00000152078.5
ENTREZID 148534
Uniprot
Q96MV1
Protein Name
Transmembrane protein 56
Expression levels of TMEM56[ENSG00000152078.5]
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