EnhancerDB
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Enhancers that regulate TMEM178A[ENSG00000152154.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 39792725 39800675 enh18471 39892122 91447
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
chr2 39800503 39800829 vista31149 39892122 91293
VISTA
chr2 39808907 39814221 enh33241 39892122 77901
Muscle (Myoblast) Astrocyte Muscle (Myotube)
chr2 39818858 39823316 enh44760 39892122 68806
Muscle (Myoblast) Muscle (A673) Muscle (Myotube)
chr2 39831807 39838555 enh44761 39892122 53567
Pancreas Muscle (Myotube) Neural Stem Cells (H9) Heart
chr2 39845188 39849588 enh44762 39892122 42534
Muscle (Myoblast) Muscle (Myotube) Ovary
chr2 39850465 39862372 enh33242 39892122 29750
Prostate (PC-3) Large Intestine Astrocyte Bone (Osteoblast) Muscle (Myoblast)
chr2 39866665 39878955 enh33243 39892122 13167
Prostate (PC-3) Astrocyte Bone (Osteoblast) Thyroid Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr2 39889888 39890115 vista31150 39892122 2007
VISTA
chr2 39893972 39894493 vista31151 39892122 1850
VISTA
chr2 39908564 39913021 enh65257 39892122 16442
Heart
chr2 39917142 39917449 vista31152 39892122 25020
VISTA
chr2 39919692 39919788 vista31153 39892122 27570
VISTA
chr2 39920072 39924775 enh33244 39892122 27950
Astrocyte Heart
chr2 39948045 39958487 enh33245 39892122 55923
Prostate (PC-3) Brain (SK-N-SH) Astrocyte Heart Epithelial (MCF-7)
chr2 39964205 39971255 enh33246 39892122 72083
Astrocyte Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript facotrs that regulate TMEM178A[ENSG00000152154.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 39889901 39889915 ZIC1 JASPAR yes 39892122 2207 22039693
chr2 39889901 39889916 ZIC4 JASPAR yes 39892122 2206 22039694
chr2 39889914 39889924 BARHL2 JASPAR yes 39892122 2198 22039695
chr2 39889950 39889965 PRDM1 JASPAR yes 39892122 2157 22039696
chr2 39889956 39889961 ETS2 TRANSFAC yes 39892122 2161 22039697
chr2 39889976 39889980 NFE TRANSFAC yes 39892122 2142 22039698
chr2 39889977 39889982 GATA2 JASPAR yes 39892122 2140 22039699
chr2 39889993 39890003 HOXB3 JASPAR yes 39892122 2119 22039700
chr2 39889996 39890000 YY1 TRANSFAC yes 39892122 2122 22039701
chr2 39890009 39890012 MYB TRANSFAC yes 39892122 2110 22039702
chr2 39890011 39890021 HOXC10 JASPAR yes 39892122 2101 22039703
chr2 39890011 39890021 HOXD11 JASPAR yes 39892122 2101 22039704
chr2 39890011 39890022 HOXC11 JASPAR yes 39892122 2100 22039705
chr2 39890011 39890022 HOXC12 JASPAR yes 39892122 2100 22039706
chr2 39890012 39890021 CDX1 JASPAR yes 39892122 2101 22039707
chr2 39890012 39890023 CDX2 JASPAR yes 39892122 2099 22039708
chr2 39890038 39890045 NKX3-1 JASPAR yes 39892122 2077 22039709
chr2 39890043 39890047 YY1 TRANSFAC yes 39892122 2075 22039710
chr2 39893985 39893997 ZBTB7A JASPAR yes 39892122 1863 22039711
chr2 39893998 39894009 E2F6 JASPAR yes 39892122 1876 22039712
chr2 39894002 39894007 ETS2 TRANSFAC yes 39892122 1880 22039713
chr2 39894029 39894040 GCM1 JASPAR yes 39892122 1907 22039714
chr2 39894034 39894047 SMAD2 JASPAR yes 39892122 1912 22039715
chr2 39894056 39894060 ESR1 TRANSFAC yes 39892122 1934 22039716
chr2 39894080 39894099 PAX5 JASPAR yes 39892122 1958 22039717
chr2 39894082 39894086 LFA1 TRANSFAC yes 39892122 1960 22039718
chr2 39894096 39894111 HSF1 JASPAR yes 39892122 1974 22039719
chr2 39894105 39894113 EHF JASPAR yes 39892122 1983 22039720
chr2 39894107 39894112 ETS2 TRANSFAC yes 39892122 1985 22039721
chr2 39894120 39894129 NKX2-8 JASPAR yes 39892122 1998 22039722
chr2 39894125 39894145 RREB1 JASPAR yes 39892122 2003 22039723
chr2 39894137 39894148 FOXH1 JASPAR yes 39892122 2015 22039724
chr2 39894138 39894144 ZNF354C JASPAR yes 39892122 2016 22039725
chr2 39894138 39894148 GSC2 JASPAR yes 39892122 2016 22039726
chr2 39894138 39894148 GSC JASPAR yes 39892122 2016 22039727
chr2 39894157 39894161 H1TF2 TRANSFAC yes 39892122 2035 22039728
chr2 39894157 39894161 NFE TRANSFAC yes 39892122 2035 22039729
chr2 39894157 39894161 SRF TRANSFAC yes 39892122 2035 22039730
chr2 39894165 39894185 RREB1 JASPAR yes 39892122 2043 22039731
chr2 39894189 39894200 TFAP2A JASPAR yes 39892122 2067 22039732
chr2 39894189 39894200 TFAP2B JASPAR yes 39892122 2067 22039733
chr2 39894189 39894200 TFAP2C JASPAR yes 39892122 2067 22039734
chr2 39894190 39894199 TFAP2A JASPAR yes 39892122 2068 22039735
chr2 39894199 39894205 GATA3 JASPAR yes 39892122 2077 22039736
chr2 39894205 39894215 ID4 JASPAR yes 39892122 2083 22039737
chr2 39894205 39894215 MSC JASPAR yes 39892122 2083 22039738
chr2 39894205 39894215 TCF3 JASPAR yes 39892122 2083 22039739
chr2 39894205 39894215 TCF4 JASPAR yes 39892122 2083 22039740
chr2 39894206 39894215 SNAI2 JASPAR yes 39892122 2084 22039741
chr2 39894207 39894212 USF2 TRANSFAC yes 39892122 2085 22039742
chr2 39894221 39894229 EHF JASPAR yes 39892122 2099 22039743
chr2 39894232 39894252 RREB1 JASPAR yes 39892122 2110 22039744
chr2 39894233 39894247 PLAG1 JASPAR yes 39892122 2111 22039745
chr2 39894233 39894253 RREB1 JASPAR yes 39892122 2111 22039746
chr2 39894234 39894255 ZNF263 JASPAR yes 39892122 2112 22039747
chr2 39894253 39894270 BCL6B JASPAR yes 39892122 2131 22039748
chr2 39894255 39894259 NFE TRANSFAC yes 39892122 2133 22039749
chr2 39894286 39894300 RXRB JASPAR yes 39892122 2164 22039750
chr2 39894286 39894300 RXRG JASPAR yes 39892122 2164 22039751
chr2 39894299 39894314 HSF1 JASPAR yes 39892122 2177 22039752
chr2 39894302 39894320 SRF JASPAR yes 39892122 2180 22039753
chr2 39894304 39894320 SRF JASPAR yes 39892122 2182 22039754
chr2 39894304 39894322 SRF JASPAR yes 39892122 2182 22039755
chr2 39894315 39894319 LFA1 TRANSFAC yes 39892122 2193 22039756
chr2 39894326 39894340 GATA2 JASPAR yes 39892122 2204 22039757
chr2 39894340 39894344 NFE TRANSFAC yes 39892122 2218 22039758
chr2 39894364 39894384 RREB1 JASPAR yes 39892122 2242 22039759
chr2 39894366 39894386 RREB1 JASPAR yes 39892122 2244 22039760
chr2 39894368 39894388 RREB1 JASPAR yes 39892122 2246 22039761
chr2 39894369 39894389 RREB1 JASPAR yes 39892122 2247 22039762
chr2 39894373 39894379 TCF4 TRANSFAC yes 39892122 2251 22039763
chr2 39894373 39894393 RREB1 JASPAR yes 39892122 2251 22039764
chr2 39894375 39894390 FOXA1 JASPAR yes 39892122 2253 22039765
chr2 39894376 39894388 FOXI1 JASPAR yes 39892122 2254 22039766
chr2 39894377 39894389 FOXC2 JASPAR yes 39892122 2255 22039767
chr2 39894379 39894390 FOXA1 JASPAR yes 39892122 2257 22039768
chr2 39894380 39894395 FOXP1 JASPAR yes 39892122 2258 22039769
chr2 39894385 39894391 TCF4 TRANSFAC yes 39892122 2263 22039770
chr2 39894390 39894399 NFIX JASPAR yes 39892122 2268 22039771
chr2 39894391 39894397 NFIC JASPAR yes 39892122 2269 22039772
chr2 39894434 39894447 SCRT2 JASPAR yes 39892122 2312 22039773
chr2 39894437 39894449 PKNOX2 JASPAR yes 39892122 2315 22039774
chr2 39894437 39894450 ZBTB18 JASPAR yes 39892122 2315 22039775
chr2 39894438 39894448 FIGLA JASPAR yes 39892122 2316 22039776
chr2 39894438 39894448 ID4 JASPAR yes 39892122 2316 22039777
chr2 39894438 39894448 MSC JASPAR yes 39892122 2316 22039778
chr2 39894438 39894448 MYF6 JASPAR yes 39892122 2316 22039779
chr2 39894438 39894448 TCF3 JASPAR yes 39892122 2316 22039780
chr2 39894438 39894448 TCF4 JASPAR yes 39892122 2316 22039781
chr2 39894439 39894448 SNAI2 JASPAR yes 39892122 2317 22039782
chr2 39894440 39894445 USF2 TRANSFAC yes 39892122 2318 22039783
chr2 39894443 39894447 NFE TRANSFAC yes 39892122 2321 22039784
chr2 39894459 39894463 NFE TRANSFAC yes 39892122 2337 22039785
chr2 39894464 39894470 GATA3 JASPAR yes 39892122 2342 22039786
chr2 39894467 39894481 STAT1 JASPAR yes 39892122 2345 22039787
chr2 39894468 39894480 IRF1 JASPAR yes 39892122 2346 22039788
chr2 39894469 39894490 IRF1 JASPAR yes 39892122 2347 22039789
chr2 39894470 39894491 IRF1 JASPAR yes 39892122 2348 22039790
chr2 39894474 39894489 FOXP1 JASPAR yes 39892122 2352 22039791
chr2 39894475 39894490 FOXP1 JASPAR yes 39892122 2353 22039792
chr2 39894476 39894491 FOXP1 JASPAR yes 39892122 2354 22039793
chr2 39894477 39894492 FOXP1 JASPAR yes 39892122 2355 22039794
chr2 39894478 39894493 FOXP1 JASPAR yes 39892122 2356 22039795
SNPs associated with TMEM178A[ENSG00000152154.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 40430611 rs17504446 A C 485508 Esophagus 0.329718 5672423
chr2 39664659 rs56128332 C T 227463 Esophagus 0.00157851 5667714
chr2 39834510 rs112661155 G A 57612 Heart 0.0524398 5669126
chr2 39755749 rs13391377 T C 136373 Heart 6.75643e-09 5668588
chr2 39855472 rs551782329 A AC 36650 Pancreas 0.0535545 5669297
chr2 39749579 rs72803115 A G 142543 Breast 0.132185 5668497
chr2 39793579 rs1526029 T A,G 98543 Spleen 0.199686 5668835
chr2 39547147 rs72925257 T G 344975 Ovary 0.352442 5666946
chr2 39867657 rs2540215 G A 24465 Thyroid 0.000321408 5669426
chr2 39733625 rs17466784 G A 158497 Stomach 0.0457277 5668348
chr2 40067340 rs7576220 T A,C 122237 Adrenal 0.0474554 5670120
Details of TMEM178A[ENSG00000152154.6]
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Genomic Location chr2:39892122-39945103[+]
TSS 39892122
Gene Name TMEM178A
Ensembl ID ENSG00000152154.6
ENTREZID 130733
Uniprot
Q8NBL3
Protein Name
Transmembrane protein 178A
Expression levels of TMEM178A[ENSG00000152154.6]
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