EnhancerDB
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Enhancers that regulate SSU72[ENSG00000160075.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 1437165 1442515 enh1 1510249 67734
Bone Marrow (K562) Esophagus Stomach Placenta Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7)
chr1 1456676 1456699 vista41 1510249 53550
VISTA
chr1 1483768 1499812 enh11414 1510249 10437
Epithelial (MCF-7) Prostate (RWPE1) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Thyroid Heart
chr1 1500545 1505655 enh11415 1510249 4594
Muscle (Myoblast) Muscle (Myotube) Placenta Bone (Osteoblast)
chr1 1527997 1532141 enh89451 1510249 17748
Prostate (RWPE1)
chr1 1540565 1544715 enh107359 1510249 30316
Blood (T-cell)
chr1 1607365 1622353 enh2 1510249 97116
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
chr1 1609619 1609864 vista42 1510249 99370
VISTA
Transcript facotrs that regulate SSU72[ENSG00000160075.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 1505248 1505253 ETS2 TRANSFAC yes 1510249 4996 26196232
chr1 1505264 1505268 YY1 TRANSFAC yes 1510249 4981 26196233
chr1 1505287 1505298 NFIL3 JASPAR yes 1510249 4951 26196234
chr1 1505343 1505347 YY1 TRANSFAC yes 1510249 4902 26196235
chr1 1505344 1505352 FEV JASPAR yes 1510249 4897 26196236
chr1 1505364 1505368 YY1 TRANSFAC yes 1510249 4881 26196237
chr1 1505368 1505378 TBR1 JASPAR yes 1510249 4871 26196238
chr1 1505368 1505379 TBX2 JASPAR yes 1510249 4870 26196239
chr1 1505370 1505373 MYB TRANSFAC yes 1510249 4876 26196240
chr1 1505419 1505422 MYB TRANSFAC yes 1510249 4827 26196241
chr1 1505432 1505436 NFE TRANSFAC yes 1510249 4813 26196242
chr1 1505461 1505476 MEF2A JASPAR yes 1510249 4773 26196243
chr1 1505462 1505474 MEF2A JASPAR yes 1510249 4775 26196244
chr1 1505462 1505474 MEF2D JASPAR yes 1510249 4775 26196245
chr1 1505473 1505493 RREB1 JASPAR yes 1510249 4756 26196246
chr1 1505474 1505488 ONECUT1 JASPAR yes 1510249 4761 26196247
chr1 1505474 1505488 ONECUT2 JASPAR yes 1510249 4761 26196248
chr1 1505474 1505488 ONECUT3 JASPAR yes 1510249 4761 26196249
chr1 1505478 1505487 SOX9 JASPAR yes 1510249 4762 26196250
chr1 1505487 1505493 SOX10 JASPAR yes 1510249 4756 26196251
chr1 1505494 1505506 FOXI1 JASPAR yes 1510249 4743 26196252
chr1 1505511 1505525 IRF7 JASPAR yes 1510249 4724 26196253
chr1 1505513 1505525 IRF1 JASPAR yes 1510249 4724 26196254
chr1 1505537 1505550 SMAD2 JASPAR yes 1510249 4699 26196255
chr1 1505540 1505550 TBR1 JASPAR yes 1510249 4699 26196256
chr1 1505540 1505551 TBX2 JASPAR yes 1510249 4698 26196257
chr1 1505541 1505551 TBX21 JASPAR yes 1510249 4698 26196258
chr1 1505542 1505550 MGA JASPAR yes 1510249 4699 26196259
chr1 1505542 1505550 TBX15 JASPAR yes 1510249 4699 26196260
chr1 1505542 1505550 TBX1 JASPAR yes 1510249 4699 26196261
chr1 1505542 1505550 TBX4 JASPAR yes 1510249 4699 26196262
chr1 1505542 1505550 TBX5 JASPAR yes 1510249 4699 26196263
chr1 1505542 1505551 ZEB1 JASPAR yes 1510249 4698 26196264
chr1 1505542 1505554 PKNOX1 JASPAR yes 1510249 4695 26196265
chr1 1505542 1505554 TGIF1 JASPAR yes 1510249 4695 26196266
chr1 1505542 1505555 ZBTB18 JASPAR yes 1510249 4694 26196267
chr1 1505543 1505553 FIGLA JASPAR yes 1510249 4696 26196268
chr1 1505543 1505553 ID4 JASPAR yes 1510249 4696 26196269
chr1 1505543 1505553 TCF3 JASPAR yes 1510249 4696 26196270
chr1 1505543 1505553 TCF4 JASPAR yes 1510249 4696 26196271
chr1 1505544 1505553 SNAI2 JASPAR yes 1510249 4696 26196272
chr1 1505545 1505550 USF2 TRANSFAC yes 1510249 4699 26196273
chr1 1505610 1505619 NKX2-8 JASPAR yes 1510249 4630 26196274
chr1 1505610 1505620 NKX2-3 JASPAR yes 1510249 4629 26196275
chr1 1505624 1505638 MTF1 JASPAR yes 1510249 4611 26196276
chr1 1505628 1505638 SREBF1 JASPAR yes 1510249 4611 26196277
chr1 1505628 1505638 SREBF2 JASPAR yes 1510249 4611 26196278
SNPs associated with SSU72[ENSG00000160075.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 1496145 rs12410854 T C 0 Esophagus 1.2966e-14 7715
chr1 1510801 rs7519837 C T 552 Esophagus 0.00203407 7882
chr1 1436055 rs142108975 A C,T 40998 Breast 0.219137 7309
chr1 1505041 rs6603792 T C 0 Spleen 0.00342177 7842
Details of SSU72[ENSG00000160075.10]
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Genomic Location chr1:1477053-1510249[-]
TSS 1510249
Gene Name SSU72
Ensembl ID ENSG00000160075.10
ENTREZID 29101
Uniprot
Q9NP77
Protein Name
RNA polymerase II subunit A C-terminal domain phosphatase SSU72
Expression levels of SSU72[ENSG00000160075.10]
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