EnhancerDB
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Enhancers that regulate SQSTM1[ENSG00000161011.15]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr5 179159137 179159324 vista50369 179233388 74064
VISTA
chr5 179162365 179166515 enh101962 179233388 66873
Thyroid
chr5 179179145 179184415 enh72137 179233388 48973
Liver (HepG2) Neural Stem Cells (H9) Blood (T-cell) Ovary
chr5 179185005 179195695 enh8908 179233388 37693
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Blood (T-cell) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Heart
chr5 179188972 179189165 vista50370 179233388 44223
VISTA
chr5 179206190 179206408 vista50371 179233388 26980
VISTA
chr5 179217685 179222075 enh108047 179233388 11313
Blood (T-cell)
chr5 179241645 179258975 enh22874 179233388 8257
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Stomach
Transcript facotrs that regulate SQSTM1[ENSG00000161011.15]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with SQSTM1[ENSG00000161011.15], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr5 179507865 rs528869054 G GC 242787 Esophagus 0.18197 8747190
chr5 179248774 rs502729 A C 0 Heart 0.0593325 8746328
chr5 178681211 rs59203082 C T 552177 Uterus 0.252053 8742179
chr5 179250392 rs10464093 G A 0 Thyroid 4.38511e-12 8746362
Details of SQSTM1[ENSG00000161011.15]
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Genomic Location chr5:179233388-179265078[+]
TSS 179233388
Gene Name SQSTM1
Ensembl ID ENSG00000161011.15
ENTREZID 8878
Uniprot
Q13501
Protein Name
Sequestosome-1
Expression levels of SQSTM1[ENSG00000161011.15]
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