EnhancerDB
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Enhancers that regulate LEMD2[ENSG00000161904.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 33672245 33676395 enh106194 33756913 80518
Peripheral Blood (MM.1S)
chr6 33682285 33688679 enh63526 33756913 68234
Esophagus Stomach Lung (PC-9) Epithelial (MCF-7)
chr6 33684801 33685193 vista51650 33756913 71720
VISTA
chr6 33694225 33702855 enh23160 33756913 54058
Prostate (PC-3) Placenta Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
chr6 33699058 33699289 vista51651 33756913 57624
VISTA
chr6 33706005 33713155 enh55714 33756913 43758
Uterus Large Intestine Lung (PC-9)
chr6 33712309 33712484 vista51652 33756913 44429
VISTA
chr6 33717965 33732334 enh46106 33756913 24579
Prostate (PC-3) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Thyroid Pancreas Muscle (Myotube) Uterus Heart
chr6 33734425 33738635 enh55715 33756913 18278
Ovary Large Intestine Esophagus Stomach Uterus Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr6 33778361 33787555 enh77848 33756913 21448
Muscle (A673) Thyroid Embryonic Stem Cell Line (H1-hESC)
chr6 33781645 33781809 vista51653 33756913 24732
VISTA
chr6 33788253 33799247 enh86618 33756913 31340
Brain (SK-N-SH) Thyroid Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Spleen Uterus
chr6 33792376 33792455 vista51654 33756913 35463
VISTA
chr6 33800769 33816388 enh23161 33756913 43856
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr6 33818239 33818267 vista51655 33756913 61326
VISTA
chr6 33820705 33826055 enh55716 33756913 63792
Pancreas Large Intestine
chr6 33823941 33824081 vista51656 33756913 67028
VISTA
chr6 33827645 33831795 enh106195 33756913 70732
Peripheral Blood (MM.1S)
chr6 33843805 33858235 enh55717 33756913 86892
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Bone (Osteoblast) Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Blood (T-cell)
Transcript facotrs that regulate LEMD2[ENSG00000161904.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with LEMD2[ENSG00000161904.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 33736285 rs7774620 T A 2694 Esophagus 0.00229183 8976006
chr6 33738314 rs943471 C T 665 Heart 3.27225e-07 8976040
chr6 33749739 rs6922275 G A 0 Pancreas 0.00663645 8976077
chr6 33970747 rs9469669 C G 213834 Spleen 0.0948281 8978369
chr6 33749151 rs12196293 A G 0 Uterus 0.340018 8976065
Details of LEMD2[ENSG00000161904.7]
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Genomic Location chr6:33738979-33756913[-]
TSS 33756913
Gene Name LEMD2
Ensembl ID ENSG00000161904.7
ENTREZID 221496
Uniprot
A0A024RCZ1
Q8NC56
Protein Name
isoform CRA_a
LEM domain containing 2
LEM domain-containing protein 2
Expression levels of LEMD2[ENSG00000161904.7]
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