EnhancerDB
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Enhancers that regulate RBP7[ENSG00000162444.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 9956449 9968797 enh11490 10057264 88467
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Uterus Heart
chr1 9960528 9960713 vista317 10057264 96551
VISTA
chr1 9980499 9987615 enh66840 10057264 69649
Neural Stem Cells (H9)
chr1 10008297 10013755 enh55 10057264 43509
Bone Marrow (K562) Esophagus Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Uterus Blood (T-cell) Epithelial (MCF-7)
chr1 10015885 10023499 enh56 10057264 33765
Cervix (HeLa-S3) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Neural Stem Cells (H9)
chr1 10057852 10058069 vista318 10057264 588
VISTA
chr1 10076705 10084378 enh74139 10057264 19441
Muscle (A673) Brain (SK-N-SH) Epithelial (MCF-7)
chr1 10100885 10109475 enh11491 10057264 43621
Bone Marrow (K562) Liver (HepG2) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Pancreas Uterus Heart
chr1 10113864 10131352 enh11492 10057264 56600
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 10127211 10127315 vista319 10057264 69947
VISTA
chr1 10132545 10140795 enh98424 10057264 75281
Adrenal Uterus
chr1 10141182 10147475 enh11493 10057264 83918
Skin (Keratinocyte) Placenta Liver (HepG2) Prostate (RWPE1)
Transcript facotrs that regulate RBP7[ENSG00000162444.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 10057852 10057867 TFAP2A JASPAR yes 10057264 588 118228193
chr1 10057852 10057867 TFAP2C JASPAR yes 10057264 588 118228194
chr1 10057853 10057862 TFAP2A JASPAR yes 10057264 589 118228195
chr1 10057854 10057863 TFAP2A JASPAR yes 10057264 590 118228196
chr1 10057858 10057863 SP1 TRANSFAC yes 10057264 594 118228197
chr1 10057861 10057870 TFAP2A JASPAR yes 10057264 597 118228198
chr1 10057957 10057961 H4TF2 TRANSFAC yes 10057264 693 118228199
chr1 10057961 10057972 NRF1 JASPAR yes 10057264 697 118228200
chr1 10057962 10057966 LFA1 TRANSFAC yes 10057264 698 118228201
chr1 10057962 10057977 ZBTB33 JASPAR yes 10057264 698 118228202
chr1 10057991 10058003 TFAP2A JASPAR yes 10057264 727 118228203
chr1 10057992 10058003 TFAP2A JASPAR yes 10057264 728 118228204
chr1 10057993 10058002 TFAP2A JASPAR yes 10057264 729 118228205
chr1 10058015 10058029 GLIS2 JASPAR yes 10057264 751 118228206
chr1 10058015 10058029 GLIS3 JASPAR yes 10057264 751 118228207
chr1 10058018 10058033 ZBTB33 JASPAR yes 10057264 754 118228208
chr1 10058019 10058032 TFAP2A JASPAR yes 10057264 755 118228209
chr1 10058026 10058036 SP1 JASPAR yes 10057264 762 118228210
chr1 10058026 10058046 ESR1 JASPAR yes 10057264 762 118228211
chr1 10058035 10058046 TFAP2A JASPAR yes 10057264 771 118228212
chr1 10058035 10058046 TFAP2B JASPAR yes 10057264 771 118228213
chr1 10058035 10058046 TFAP2C JASPAR yes 10057264 771 118228214
chr1 10058036 10058045 TFAP2A JASPAR yes 10057264 772 118228215
chr1 10058054 10058063 TFAP2A JASPAR yes 10057264 790 118228216
chr1 10058058 10058063 SP1 TRANSFAC yes 10057264 794 118228217
SNPs associated with RBP7[ENSG00000162444.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 10348685 rs12734499 C T 272607 Esophagus 0.0898359 71481
chr1 10083936 rs58528460 A G 7858 Esophagus 0.012866 70086
chr1 9830586 rs76606485 C T 226678 Esophagus 0.322322 68071
chr1 10743947 rs7555370 G A 667869 Heart 0.00469825 73887
chr1 9456513 rs9442595 C G,T 600751 Heart 0.0755081 64882
chr1 10889887 rs79648981 C T 813809 Ovary 0.192711 75766
chr1 9892300 rs12042866 C T 164964 Uterus 0.288756 68845
chr1 10369546 rs12737841 T C 293468 Stomach 3.73213e-05 71534
Details of RBP7[ENSG00000162444.11]
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Genomic Location chr1:10057264-10076078[+]
TSS 10057264
Gene Name RBP7
Ensembl ID ENSG00000162444.11
ENTREZID 116362
Uniprot
Q96R05
Protein Name
RBP7 protein
Retinoid-binding protein 7
Expression levels of RBP7[ENSG00000162444.11]
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