Enhancers that regulate LMX1A[ENSG00000162761.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 165221185 165231175 enh79233 165325952 94777
chr1 165243187 165247337 enh67154 165325952 78615
chr1 165251765 165261615 enh74406 165325952 64337
chr1 165313524 165313726 vista3724 165325952 12226
chr1 165319408 165319638 vista3725 165325952 6314
chr1 165323712 165323885 vista3726 165325952 2067
chr1 165331871 165336881 enh61919 165325952 5919
chr1 165339165 165355255 enh79234 165325952 13213
chr1 165345662 165345996 vista3727 165325952 19710
chr1 165360225 165364459 enh61920 165325952 34273
chr1 165364905 165369435 enh109360 165325952 38953
chr1 165423505 165427655 enh95913 165325952 97553

Transcript facotrs that regulate LMX1A[ENSG00000162761.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 165322852 165323996 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 165325952 1956 107843006
chr1 165323166 165323766 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 165325952 2186 107843007
chr1 165323475 165323785 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 165325952 2167 107843008
chr1 165323725 165323735 ETV5 JASPAR yes 165325952 2217 118390868
chr1 165323725 165323735 GABPA JASPAR yes 165325952 2217 118390869
chr1 165323727 165323733 ETS1 JASPAR yes 165325952 2219 118390870
chr1 165323727 165323733 SPI1 JASPAR yes 165325952 2219 118390871
chr1 165323737 165323743 ETS1 JASPAR yes 165325952 2209 118390872
chr1 165323737 165323743 SPI1 JASPAR yes 165325952 2209 118390873
chr1 165323748 165323752 LFA1 TRANSFAC yes 165325952 2200 118390874
chr1 165323750 165323821 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 165325952 2131 107843009
chr1 165323758 165323771 HSF1 JASPAR yes 165325952 2181 118390875
chr1 165323758 165323771 HSF2 JASPAR yes 165325952 2181 118390876
chr1 165323758 165323771 HSF4 JASPAR yes 165325952 2181 118390877
chr1 165323774 165323788 TCF7L2 JASPAR yes 165325952 2164 118390878
chr1 165323778 165323784 TCF1 TRANSFAC yes 165325952 2168 118390879
chr1 165323797 165323807 BHLHE40 JASPAR yes 165325952 2145 118390880
chr1 165323797 165323807 BHLHE41 JASPAR yes 165325952 2145 118390881
chr1 165323797 165323807 MLXIPL JASPAR yes 165325952 2145 118390882
chr1 165323797 165323807 MLX JASPAR yes 165325952 2145 118390883
chr1 165323797 165323807 MNT JASPAR yes 165325952 2145 118390884
chr1 165323797 165323807 TFE3 JASPAR yes 165325952 2145 118390885
chr1 165323798 165323808 MAX JASPAR yes 165325952 2144 118390886
chr1 165323799 165323804 MYC TRANSFAC yes 165325952 2148 118390887
chr1 165323799 165323804 USF1 TRANSFAC yes 165325952 2148 118390888
chr1 165323799 165323804 USF2 TRANSFAC yes 165325952 2148 118390889
chr1 165323804 165323809 H4TF1 TRANSFAC yes 165325952 2143 118390890
chr1 165323806 165323821 LEF1 JASPAR yes 165325952 2131 118390891
chr1 165323816 165323836 RREB1 JASPAR yes 165325952 2116 118390892
chr1 165323817 165323837 RREB1 JASPAR yes 165325952 2115 118390893
chr1 165323819 165323839 RREB1 JASPAR yes 165325952 2113 118390894
chr1 165323825 165323835 ZNF740 JASPAR yes 165325952 2117 118390895
chr1 165323827 165323837 SP1 JASPAR yes 165325952 2115 118390896
chr1 165323830 165323835 SP1 TRANSFAC yes 165325952 2117 118390897
chr1 165323832 165323837 TFAP2A TRANSFAC yes 165325952 2115 118390898
chr1 165323832 165323838 MZF1 JASPAR yes 165325952 2114 118390899
chr1 165323834 165323844 RELA JASPAR yes 165325952 2108 118390900
chr1 165323834 165323844 REL JASPAR yes 165325952 2108 118390901
chr1 165323834 165323845 NFKB1 JASPAR yes 165325952 2107 118390902
chr1 165323843 165324697 SOX2 GTRD no Neural Stem Cells (H9) 165325952 1255 107843010
chr1 165323865 165323883 NR3C1 JASPAR yes 165325952 2069 118390903
chr1 165323871 165323875 NFE TRANSFAC yes 165325952 2077 118390904

Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 166048053 rs6703870 A G 722101 Uterus 0.309151 696510

Genomic Location chr1:165171104-165325952[-]
TSS 165325952
Gene Name LMX1A
Ensembl ID ENSG00000162761.10
ENTREZID 4009
Uniprot
Q8TE12
Protein Name
alpha
LIM homeobox transcription factor 1
LIM homeobox transcription factor 1-alpha