EnhancerDB
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Enhancers that regulate GYG1[ENSG00000163754.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr3 148605725 148609875 enh113326 148709128 99253
Brain (SK-N-MC)
chr3 148617854 148623200 enh35968 148709128 85928
Muscle (Myoblast) Astrocyte Bone (Osteoblast) Lung (PC-9)
chr3 148627085 148631235 enh97368 148709128 77893
Epithelial (MCF-7)
chr3 148646705 148652635 enh35969 148709128 56493
Astrocyte Uterus
chr3 148653365 148658355 enh35970 148709128 50773
Astrocyte
chr3 148660888 148660915 vista42717 148709128 48213
VISTA
chr3 148662845 148680575 enh35971 148709128 28553
Cervix (HeLa-S3) Large Intestine Ovary Esophagus Astrocyte Liver Bone (Osteoblast) Lung Stomach Pancreas (Panc1) Uterus Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Thymus Kidney
chr3 148687665 148695261 enh95126 148709128 13867
Muscle (Myoblast) Uterus
chr3 148704982 148705163 vista42718 148709128 3965
VISTA
chr3 148713514 148720355 enh70891 148709128 4386
Peripheral Blood (MM.1S) Neural Stem Cells (H9)
chr3 148729625 148740947 enh35972 148709128 20497
Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Stomach Uterus Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
chr3 148781596 148781850 vista42719 148709128 72468
VISTA
chr3 148781933 148782210 vista42720 148709128 72805
VISTA
chr3 148793085 148800877 enh35973 148709128 83957
Muscle (Myoblast) Astrocyte Uterus Epithelial (MCF-7)
Transcript facotrs that regulate GYG1[ENSG00000163754.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr3 148704996 148705009 NFKB1 JASPAR yes 148709128 4119 71064423
chr3 148704997 148705007 RELA JASPAR yes 148709128 4121 71064424
chr3 148704997 148705008 NFKB1 JASPAR yes 148709128 4120 71064425
chr3 148705007 148705013 MZF1 JASPAR yes 148709128 4115 71064426
chr3 148705012 148705026 EBF1 JASPAR yes 148709128 4102 71064427
chr3 148705014 148705025 EBF1 JASPAR yes 148709128 4103 71064428
chr3 148705025 148705039 GLIS2 JASPAR yes 148709128 4089 71064429
chr3 148705025 148705039 GLIS3 JASPAR yes 148709128 4089 71064430
chr3 148705026 148705045 PAX5 JASPAR yes 148709128 4083 71064431
chr3 148705026 148705047 ZNF263 JASPAR yes 148709128 4081 71064432
chr3 148705055 148705064 THAP1 JASPAR yes 148709128 4064 71064433
chr3 148705055 148705066 GCM1 JASPAR yes 148709128 4062 71064434
chr3 148705072 148705093 REST JASPAR yes 148709128 4035 71064435
chr3 148705076 148705080 NFE TRANSFAC yes 148709128 4048 71064436
chr3 148705084 148705105 ZNF263 JASPAR yes 148709128 4023 71064437
chr3 148705089 148705099 SP1 JASPAR yes 148709128 4029 71064438
chr3 148705092 148705112 RREB1 JASPAR yes 148709128 4016 71064439
chr3 148705094 148705114 RREB1 JASPAR yes 148709128 4014 71064440
chr3 148705105 148705110 SP1 TRANSFAC yes 148709128 4018 71064441
chr3 148705120 148705134 GLIS3 JASPAR yes 148709128 3994 71064442
chr3 148705136 148705146 SP1 JASPAR yes 148709128 3982 71064443
chr3 148705142 148705163 ZNF263 JASPAR yes 148709128 3965 71064444
chr3 148705143 148705147 ESR1 TRANSFAC yes 148709128 3981 71064445
chr3 148705144 148705153 SNAI2 JASPAR yes 148709128 3975 71064446
chr3 148705146 148705155 ZEB1 JASPAR yes 148709128 3973 71064447
chr3 148705147 148705155 TBX5 JASPAR yes 148709128 3973 71064448
chr3 148705151 148705161 ZNF740 JASPAR yes 148709128 3967 71064449
chr3 148705153 148705163 MZF1 JASPAR yes 148709128 3965 71064450
chr3 148713577 148713583 ZNF354C JASPAR yes 148709128 4449 6466272
chr3 148713608 148713618 HMBOX1 JASPAR yes 148709128 4480 6466273
chr3 148713621 148713625 LFA1 TRANSFAC yes 148709128 4493 6466274
chr3 148713659 148713669 POU6F2 JASPAR yes 148709128 4531 6466275
chr3 148713663 148713667 YY1 TRANSFAC yes 148709128 4535 6466276
chr3 148713667 148713674 NKX3-1 JASPAR yes 148709128 4539 6466277
chr3 148713689 148713700 CDX2 JASPAR yes 148709128 4561 6466278
chr3 148713691 148713700 CDX1 JASPAR yes 148709128 4563 6466279
chr3 148713704 148713714 HOXA13 JASPAR yes 148709128 4576 6466280
chr3 148713720 148713732 YY1 JASPAR yes 148709128 4592 6466281
chr3 148713748 148713764 T JASPAR yes 148709128 4620 6466282
chr3 148713753 148713757 YY1 TRANSFAC yes 148709128 4625 6466283
chr3 148713766 148713770 YY1 TRANSFAC yes 148709128 4638 6466284
chr3 148713791 148713802 DMRT3 JASPAR yes 148709128 4663 6466285
chr3 148713795 148713806 CDX2 JASPAR yes 148709128 4667 6466286
chr3 148713796 148713807 HOXA10 JASPAR yes 148709128 4668 6466287
chr3 148713797 148713806 CDX1 JASPAR yes 148709128 4669 6466288
chr3 148713797 148713807 HOXA13 JASPAR yes 148709128 4669 6466289
chr3 148713797 148713807 HOXB13 JASPAR yes 148709128 4669 6466290
chr3 148713797 148713807 HOXD13 JASPAR yes 148709128 4669 6466291
chr3 148713810 148713830 TP53 JASPAR yes 148709128 4682 6466292
chr3 148713830 148713834 TEAD2 TRANSFAC yes 148709128 4702 6466293
chr3 148713835 148713838 MYB TRANSFAC yes 148709128 4707 6466294
chr3 148713852 148713856 YY1 TRANSFAC yes 148709128 4724 6466295
chr3 148713887 148713901 BATF3 JASPAR yes 148709128 4759 6466296
chr3 148713890 148713895 ATF1 TRANSFAC yes 148709128 4762 6466297
chr3 148713891 148713903 MYBL1 JASPAR yes 148709128 4763 6466298
chr3 148713896 148713899 MYB TRANSFAC yes 148709128 4768 6466299
chr3 148713902 148713914 POU2F1 JASPAR yes 148709128 4774 6466300
chr3 148713902 148713915 POU3F3 JASPAR yes 148709128 4774 6466301
chr3 148713902 148713916 POU1F1 JASPAR yes 148709128 4774 6466302
chr3 148713903 148713915 POU3F1 JASPAR yes 148709128 4775 6466303
chr3 148713903 148713915 POU3F2 JASPAR yes 148709128 4775 6466304
chr3 148713903 148713916 POU2F2 JASPAR yes 148709128 4775 6466305
chr3 148713904 148713913 POU3F4 JASPAR yes 148709128 4776 6466306
chr3 148713904 148713913 POU5F1B JASPAR yes 148709128 4776 6466307
chr3 148713905 148713912 POU2F1 TRANSFAC yes 148709128 4777 6466308
chr3 148713905 148713912 POU2F2 TRANSFAC yes 148709128 4777 6466309
chr3 148713906 148713920 FOXF2 JASPAR yes 148709128 4778 6466310
chr3 148713906 148713921 FOXP1 JASPAR yes 148709128 4778 6466311
chr3 148713909 148713920 FOXP2 JASPAR yes 148709128 4781 6466312
chr3 148713909 148713921 FOXI1 JASPAR yes 148709128 4781 6466313
chr3 148713911 148713919 FOXG1 JASPAR yes 148709128 4783 6466314
chr3 148713913 148713919 HiNF-A TRANSFAC yes 148709128 4785 6466315
chr3 148713915 148713930 AR JASPAR yes 148709128 4787 6466316
chr3 148713953 148713970 NR3C1 JASPAR yes 148709128 4825 6466317
chr3 148713953 148713970 NR3C2 JASPAR yes 148709128 4825 6466318
chr3 148713982 148713993 STAT1 JASPAR yes 148709128 4854 6466319
chr3 148713985 148713997 HNF1B JASPAR yes 148709128 4857 6466320
chr3 148714002 148714013 CDX2 JASPAR yes 148709128 4874 6466321
chr3 148714003 148714014 HOXA10 JASPAR yes 148709128 4875 6466322
chr3 148714004 148714013 CDX1 JASPAR yes 148709128 4876 6466323
chr3 148714029 148714040 NFE2 JASPAR yes 148709128 4901 6466324
chr3 148714031 148714037 ESR1 TRANSFAC yes 148709128 4903 6466325
chr3 148714033 148714037 ESR1 TRANSFAC yes 148709128 4905 6466326
chr3 148714077 148714081 YY1 TRANSFAC yes 148709128 4949 6466327
chr3 148714081 148714088 MEIS1 JASPAR yes 148709128 4953 6466328
chr3 148714081 148714089 MEIS2 JASPAR yes 148709128 4953 6466329
chr3 148714103 148714117 TCF7L2 JASPAR yes 148709128 4975 6466330
chr3 148714106 148714112 LEF1 TRANSFAC yes 148709128 4978 6466331
chr3 148714106 148714112 TCF4 TRANSFAC yes 148709128 4978 6466332
chr3 148714108 148714121 DUXA JASPAR yes 148709128 4980 6466333
chr3 148714109 148714123 ATF7 JASPAR yes 148709128 4981 6466334
chr3 148714109 148714123 BATF3 JASPAR yes 148709128 4981 6466335
chr3 148714110 148714122 JDP2 JASPAR yes 148709128 4982 6466336
chr3 148714111 148714120 JUN TRANSFAC yes 148709128 4983 6466337
SNPs associated with GYG1[ENSG00000163754.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr3 148813460 rs34324881 G A 68041 Esophagus 2.15699e-05 7099046
chr3 148738637 rs73162992 G A 0 Breast 0.2464 7098819
chr3 148669092 rs11720434 A G 40036 Uterus 0.253532 7098337
chr3 148714894 rs6802828 T C 0 Thyroid 0.000190043 7098637
chr3 149360480 rs147558325 G A 615061 Liver 0.118267 7103651
chr3 149422688 rs6440634 T C 677269 Stomach 0.306741 7104347
Details of GYG1[ENSG00000163754.13]
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Genomic Location chr3:148709128-148745419[+]
TSS 148709128
Gene Name GYG1
Ensembl ID ENSG00000163754.13
ENTREZID 2992
Uniprot
P46976
Protein Name
isoform CRA_e
GYG1 protein
Glycogenin 1
Glycogenin-1
Expression levels of GYG1[ENSG00000163754.13]
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