EnhancerDB
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Enhancers that regulate UBAP1[ENSG00000165006.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 34081465 34086195 enh66654 34179003 92808
Peripheral Blood (MM.1S) Heart
chr9 34113565 34117715 enh10714 34179003 61288
Blood (Karpas-422)
chr9 34119325 34124275 enh56945 34179003 54728
Lung Large Intestine
chr9 34124231 34124372 vista61830 34179003 54631
VISTA
chr9 34137845 34145375 enh110628 34179003 33628
Adrenal Brain (SK-N-MC)
chr9 34148305 34152455 enh91917 34179003 26548
Bone Marrow (K562)
chr9 34153720 34165842 enh41869 34179003 13161
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr9 34158490 34158839 vista61831 34179003 20164
VISTA
chr9 34168335 34173995 enh66655 34179003 5008
Stomach Heart
chr9 34179799 34180083 vista61832 34179003 796
VISTA
chr9 34182234 34195995 enh10715 34179003 3231
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr9 34193349 34193568 vista61833 34179003 14346
VISTA
chr9 34196049 34213655 enh10716 34179003 17046
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung (A549) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Neural Stem Cells (H9)
chr9 34215092 34219276 enh58024 34179003 36089
Lung (A549)
chr9 34220645 34229820 enh41870 34179003 41642
Astrocyte Liver (HepG2) Bone (Osteoblast)
chr9 34233080 34233513 vista61834 34179003 54077
VISTA
chr9 34244585 34248735 enh10717 34179003 65582
Blood (Karpas-422)
chr9 34277465 34281655 enh100909 34179003 98462
Uterus Brain (SK-N-SH)
Transcript facotrs that regulate UBAP1[ENSG00000165006.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr9 34179799 34179809 FIGLA JASPAR yes 34179003 796 95346896
chr9 34179799 34179813 PLAG1 JASPAR yes 34179003 796 95346897
chr9 34179801 34179806 USF2 TRANSFAC yes 34179003 798 95346898
chr9 34179818 34179823 SP1 TRANSFAC yes 34179003 815 95346899
chr9 34179818 34179824 SP1 TRANSFAC yes 34179003 815 95346900
chr9 34179830 34180154 CEBPB UCSC Txn Factor no Conserved 34179003 827 108550270
chr9 34179840 34179845 ATF1 TRANSFAC yes 34179003 837 95346901
chr9 34179850 34179854 YY1 TRANSFAC yes 34179003 847 95346902
chr9 34179854 34179858 YY1 TRANSFAC yes 34179003 851 95346903
chr9 34179870 34179878 NR4A2 JASPAR yes 34179003 867 95346904
chr9 34179870 34179885 HNF4A JASPAR yes 34179003 867 95346905
chr9 34179871 34179885 NR2F1 JASPAR yes 34179003 868 95346906
chr9 34179871 34179885 RXRB JASPAR yes 34179003 868 95346907
chr9 34179871 34179885 RXRG JASPAR yes 34179003 868 95346908
chr9 34179871 34179886 HNF4G JASPAR yes 34179003 868 95346909
chr9 34179871 34179886 LEF1 JASPAR yes 34179003 868 95346910
chr9 34179871 34179886 NR2C2 JASPAR yes 34179003 868 95346911
chr9 34179874 34179887 NR2F1 JASPAR yes 34179003 871 95346912
chr9 34179876 34179887 ESRRA JASPAR yes 34179003 873 95346913
chr9 34179876 34179887 ESRRB JASPAR yes 34179003 873 95346914
chr9 34179877 34179885 NR4A2 JASPAR yes 34179003 874 95346915
chr9 34179877 34179892 HNF4A JASPAR yes 34179003 874 95346916
chr9 34179878 34179888 RORA JASPAR yes 34179003 875 95346917
chr9 34179878 34179893 HNF4G JASPAR yes 34179003 875 95346918
chr9 34179882 34179888 LEF1 TRANSFAC yes 34179003 879 95346919
chr9 34179882 34179888 SOX10 JASPAR yes 34179003 879 95346920
chr9 34179886 34179895 NFIX JASPAR yes 34179003 883 95346921
chr9 34179886 34179896 NFIA JASPAR yes 34179003 883 95346922
chr9 34179888 34179894 NFIC JASPAR yes 34179003 885 95346923
chr9 34179899 34179908 SRY JASPAR yes 34179003 896 95346924
chr9 34179901 34179909 FOXO3 JASPAR yes 34179003 898 95346925
chr9 34179930 34179939 HIC2 JASPAR yes 34179003 927 95346926
chr9 34179933 34179937 LFA1 TRANSFAC yes 34179003 930 95346927
chr9 34179950 34179962 POU3F1 JASPAR yes 34179003 947 95346928
chr9 34179951 34179972 IRF1 JASPAR yes 34179003 948 95346929
chr9 34179954 34179968 IRF7 JASPAR yes 34179003 951 95346930
chr9 34179957 34179972 FOXP1 JASPAR yes 34179003 954 95346931
chr9 34179957 34179978 IRF1 JASPAR yes 34179003 954 95346932
chr9 34179971 34179982 DMRT3 JASPAR yes 34179003 968 95346933
chr9 34179975 34179985 MEF2A JASPAR yes 34179003 972 95346934
chr9 34179981 34179996 RFX5 JASPAR yes 34179003 978 95346935
chr9 34179996 34180008 HLF JASPAR yes 34179003 993 95346936
chr9 34179997 34180007 CEBPB JASPAR yes 34179003 994 95346937
chr9 34179997 34180007 CEBPD JASPAR yes 34179003 994 95346938
chr9 34179997 34180007 CEBPE JASPAR yes 34179003 994 95346939
chr9 34179997 34180007 CEBPG JASPAR yes 34179003 994 95346940
chr9 34180003 34180013 TFCP2 JASPAR yes 34179003 1000 95346941
chr9 34180003 34180019 SRF JASPAR yes 34179003 1000 95346942
chr9 34180016 34180027 PHOX2A JASPAR yes 34179003 1013 95346943
chr9 34180016 34180027 PROP1 JASPAR yes 34179003 1013 95346944
chr9 34180019 34180029 HMBOX1 JASPAR yes 34179003 1016 95346945
chr9 34180025 34180032 NKX3-1 JASPAR yes 34179003 1022 95346946
chr9 34180028 34180039 NFIL3 JASPAR yes 34179003 1025 95346947
chr9 34180048 34180051 MYB TRANSFAC yes 34179003 1045 95346948
chr9 34180066 34180072 SOX10 JASPAR yes 34179003 1063 95346949
chr9 34183767 34183788 IRF1 JASPAR yes 34179003 4764 83830295
chr9 34183768 34183774 TCF4 TRANSFAC yes 34179003 4765 83830296
chr9 34183768 34183783 FOXP1 JASPAR yes 34179003 4765 83830297
chr9 34183769 34183780 FOXP2 JASPAR yes 34179003 4766 83830298
chr9 34183769 34183781 FOXC2 JASPAR yes 34179003 4766 83830299
chr9 34183769 34183784 STAT2 JASPAR yes 34179003 4766 83830300
chr9 34183770 34183785 FOXP1 JASPAR yes 34179003 4767 83830301
chr9 34183775 34183790 MEF2C JASPAR yes 34179003 4772 83830302
chr9 34183794 34183800 TCF4 TRANSFAC yes 34179003 4791 83830303
chr9 34183823 34183835 E2F1 JASPAR yes 34179003 4820 83830304
chr9 34183829 34183835 YY1 JASPAR yes 34179003 4826 83830305
chr9 34183834 34183844 SREBF1 JASPAR yes 34179003 4831 83830306
chr9 34183840 34183849 RUNX2 JASPAR yes 34179003 4837 83830307
chr9 34183901 34183921 TP53 JASPAR yes 34179003 4898 83830308
chr9 34183905 34183921 T JASPAR yes 34179003 4902 83830309
chr9 34183909 34183921 HES5 JASPAR yes 34179003 4906 83830310
chr9 34183909 34183921 HES7 JASPAR yes 34179003 4906 83830311
chr9 34183909 34183921 PKNOX2 JASPAR yes 34179003 4906 83830312
chr9 34183909 34183929 TP63 JASPAR yes 34179003 4906 83830313
chr9 34183910 34183928 TP53 JASPAR yes 34179003 4907 83830314
chr9 34183910 34183928 TP73 JASPAR yes 34179003 4907 83830315
chr9 34183920 34183939 PAX5 JASPAR yes 34179003 4917 83830316
chr9 34183923 34183932 HIC2 JASPAR yes 34179003 4920 83830317
chr9 34183937 34183952 FOXP1 JASPAR yes 34179003 4934 83830318
chr9 34183961 34183973 YY1 JASPAR yes 34179003 4958 83830319
chr9 34183969 34183987 NR3C1 JASPAR yes 34179003 4966 83830320
chr9 34183972 34183976 ESR1 TRANSFAC yes 34179003 4969 83830321
chr9 34183998 34184008 SREBF2 JASPAR yes 34179003 4995 83830322
chr9 34183998 34184009 USF1 JASPAR yes 34179003 4995 83830323
chr9 34183998 34184009 USF2 JASPAR yes 34179003 4995 83830324
SNPs associated with UBAP1[ENSG00000165006.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 34961185 rs76224851 A G 708664 Esophagus 0.129805 11002563
chr9 35177574 rs10465027 G A 925053 Pancreas 0.284242 11003112
chr9 34180023 rs10971977 A T 0 Breast 0.000118378 10999372
chr9 34701352 rs13301121 A G 448831 Uterus 0.475229 11001730
chr9 34937134 rs183506029 G A 684613 Liver 0.145418 11002418
chr9 33416500 rs7028978 A G 762503 Lung 0.00990002 10996179
Details of UBAP1[ENSG00000165006.9]
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Genomic Location chr9:34179003-34252521[+]
TSS 34179003
Gene Name UBAP1
Ensembl ID ENSG00000165006.9
ENTREZID 51271
Uniprot
Q9NZ09
Protein Name
Ubiquitin-associated protein 1
Expression levels of UBAP1[ENSG00000165006.9]
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