EnhancerDB
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Enhancers that regulate FRAT1[ENSG00000165879.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr10 98975737 98980213 enh28382 99079022 98809
Prostate (PC-3) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Lung (PC-9) Muscle (Myotube)
chr10 99009545 99013695 enh1453 99079022 65327
Blood (Karpas-422)
chr10 99032725 99042855 enh1454 99079022 36167
Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr10 99083658 99090755 enh67593 99079022 4636
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Stomach Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
chr10 99096745 99096901 vista8457 99079022 17723
VISTA
chr10 99100525 99104675 enh87798 99079022 21503
Pancreas
chr10 99108025 99112175 enh50572 99079022 29003
Large Intestine
chr10 99113804 99114043 vista8458 99079022 34782
VISTA
chr10 99164329 99178535 enh13438 99079022 85307
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Uterus Thymus Stomach
chr10 99165908 99166118 vista8459 99079022 86886
VISTA
chr10 99167112 99167183 vista8460 99079022 88090
VISTA
chr10 99168320 99168531 vista8461 99079022 89298
VISTA
chr10 99172845 99172912 vista8462 99079022 93823
VISTA
chr10 99173709 99174019 vista8463 99079022 94687
VISTA
chr10 99174702 99174858 vista8464 99079022 95680
VISTA
Transcript facotrs that regulate FRAT1[ENSG00000165879.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr10 99083660 99083664 YY1 TRANSFAC yes 99079022 4638 129387529
chr10 99083660 99083674 GATA2 JASPAR yes 99079022 4638 129387530
chr10 99083660 99083675 FOXP1 JASPAR yes 99079022 4638 129387531
chr10 99083664 99083672 GATA3 JASPAR yes 99079022 4642 129387532
chr10 99083668 99083683 FOXA1 JASPAR yes 99079022 4646 129387533
chr10 99083669 99083684 FOXP1 JASPAR yes 99079022 4647 129387534
chr10 99083670 99083682 FOXC2 JASPAR yes 99079022 4648 129387535
chr10 99083670 99083684 POU1F1 JASPAR yes 99079022 4648 129387536
chr10 99083671 99083682 FOXB1 JASPAR yes 99079022 4649 129387537
chr10 99083671 99083682 FOXC1 JASPAR yes 99079022 4649 129387538
chr10 99083671 99083687 POU4F2 JASPAR yes 99079022 4649 129387539
chr10 99083671 99083687 POU4F3 JASPAR yes 99079022 4649 129387540
chr10 99083672 99083676 YY1 TRANSFAC yes 99079022 4650 129387541
chr10 99083672 99083683 FOXA1 JASPAR yes 99079022 4650 129387542
chr10 99083673 99083688 HNF1A JASPAR yes 99079022 4651 129387543
chr10 99083675 99083682 NKX3-1 JASPAR yes 99079022 4653 129387544
chr10 99083676 99083691 FOXA1 JASPAR yes 99079022 4654 129387545
chr10 99083677 99083689 FOXI1 JASPAR yes 99079022 4655 129387546
chr10 99083678 99083690 FOXC2 JASPAR yes 99079022 4656 129387547
chr10 99083678 99083692 FOXF2 JASPAR yes 99079022 4656 129387548
chr10 99083678 99083692 ONECUT2 JASPAR yes 99079022 4656 129387549
chr10 99083678 99083692 ONECUT3 JASPAR yes 99079022 4656 129387550
chr10 99083679 99083690 FOXB1 JASPAR yes 99079022 4657 129387551
chr10 99083679 99083690 FOXC1 JASPAR yes 99079022 4657 129387552
chr10 99083680 99083684 YY1 TRANSFAC yes 99079022 4658 129387553
chr10 99083680 99083695 MEF2A JASPAR yes 99079022 4658 129387554
chr10 99083681 99083696 MEF2C JASPAR yes 99079022 4659 129387555
chr10 99083684 99083688 YY1 TRANSFAC yes 99079022 4662 129387556
chr10 99083699 99083718 PAX5 JASPAR yes 99079022 4677 129387557
chr10 99083703 99083714 NFE2L2 JASPAR yes 99079022 4681 129387558
chr10 99083707 99083711 NFE TRANSFAC yes 99079022 4685 129387559
chr10 99083729 99083739 SREBF1 JASPAR yes 99079022 4707 129387560
chr10 99083729 99083739 SREBF2 JASPAR yes 99079022 4707 129387561
chr10 99083752 99083771 CTCF JASPAR yes 99079022 4730 129387562
chr10 99083778 99083789 E2F4 JASPAR yes 99079022 4756 129387563
chr10 99083778 99083789 E2F6 JASPAR yes 99079022 4756 129387564
chr10 99083778 99083792 E2F7 JASPAR yes 99079022 4756 129387565
chr10 99083779 99083790 E2F1 JASPAR yes 99079022 4757 129387566
chr10 99083818 99083829 YY2 JASPAR yes 99079022 4796 129387567
chr10 99083822 99083828 YY1 JASPAR yes 99079022 4800 129387568
chr10 99083828 99083833 SP1 TRANSFAC yes 99079022 4806 129387569
chr10 99083845 99083857 FOXI1 JASPAR yes 99079022 4823 129387570
chr10 99083848 99083852 YY1 TRANSFAC yes 99079022 4826 129387571
chr10 99083857 99083862 SP1 TRANSFAC yes 99079022 4835 129387572
chr10 99083860 99083870 RELA JASPAR yes 99079022 4838 129387573
chr10 99083860 99083870 REL JASPAR yes 99079022 4838 129387574
chr10 99083860 99083871 NFKB1 JASPAR yes 99079022 4838 129387575
chr10 99083861 99083871 NFKB1 JASPAR yes 99079022 4839 129387576
chr10 99083867 99083873 MZF1 JASPAR yes 99079022 4845 129387577
chr10 99083899 99083902 MYB TRANSFAC yes 99079022 4877 129387578
chr10 99083903 99083913 SREBF2 JASPAR yes 99079022 4881 129387579
chr10 99083903 99083914 USF1 JASPAR yes 99079022 4881 129387580
chr10 99083903 99083914 USF2 JASPAR yes 99079022 4881 129387581
chr10 99083952 99083963 FOSL2 JASPAR yes 99079022 4930 129387582
chr10 99083961 99083971 ETS1 JASPAR yes 99079022 4939 129387583
chr10 99083961 99083971 ETV5 JASPAR yes 99079022 4939 129387584
chr10 99083968 99083989 IRF1 JASPAR yes 99079022 4946 129387585
chr10 99083969 99083984 FOXP1 JASPAR yes 99079022 4947 129387586
chr10 99083969 99083990 IRF1 JASPAR yes 99079022 4947 129387587
chr10 99083970 99083981 FOXP2 JASPAR yes 99079022 4948 129387588
chr10 99083970 99083991 IRF1 JASPAR yes 99079022 4948 129387589
chr10 99083971 99083986 FOXP1 JASPAR yes 99079022 4949 129387590
chr10 99083971 99083992 IRF1 JASPAR yes 99079022 4949 129387591
chr10 99083972 99083993 IRF1 JASPAR yes 99079022 4950 129387592
chr10 99083973 99083988 FOXP1 JASPAR yes 99079022 4951 129387593
chr10 99083973 99083994 IRF1 JASPAR yes 99079022 4951 129387594
chr10 99083974 99083989 FOXP1 JASPAR yes 99079022 4952 129387595
chr10 99083974 99083995 IRF1 JASPAR yes 99079022 4952 129387596
chr10 99083975 99083990 FOXP1 JASPAR yes 99079022 4953 129387597
chr10 99083975 99083996 IRF1 JASPAR yes 99079022 4953 129387598
chr10 99083976 99083991 FOXP1 JASPAR yes 99079022 4954 129387599
chr10 99083976 99083997 IRF1 JASPAR yes 99079022 4954 129387600
chr10 99083977 99083992 FOXP1 JASPAR yes 99079022 4955 129387601
chr10 99083978 99083993 FOXP1 JASPAR yes 99079022 4956 129387602
chr10 99083979 99083994 FOXP1 JASPAR yes 99079022 4957 129387603
chr10 99083980 99083995 FOXP1 JASPAR yes 99079022 4958 129387604
chr10 99083981 99083996 FOXP1 JASPAR yes 99079022 4959 129387605
chr10 99083981 99084002 IRF1 JASPAR yes 99079022 4959 129387606
chr10 99083982 99083997 FOXP1 JASPAR yes 99079022 4960 129387607
chr10 99083983 99083998 FOXP1 JASPAR yes 99079022 4961 129387608
chr10 99084001 99084011 NFIA JASPAR yes 99079022 4979 129387609
chr10 99084003 99084009 NFIC JASPAR yes 99079022 4981 129387610
chr10 99084005 99084026 IRF1 JASPAR yes 99079022 4983 129387611
chr10 99084012 99084027 FOXP1 JASPAR yes 99079022 4990 129387612
SNPs associated with FRAT1[ENSG00000165879.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr10 98435661 rs12267734 A G 643361 Esophagus 0.0806306 1599894
chr10 99602267 rs7903898 T A 520595 Breast 0.44268 1606661
chr10 98828669 rs2636792 T A,G 250353 Spleen 0.240027 1602494
chr10 99859410 rs60535524 G C,T 777738 Uterus 0.198799 1607288
chr10 98621499 rs144533742 C T 457523 Thyroid 0.213465 1601571
chr10 98503601 rs202187944 G GCACTTTGCA 575421 Lung 0.224068 1600557
chr10 99353276 rs61863285 A G 271604 Adrenal 0.000123755 1604907
Details of FRAT1[ENSG00000165879.7]
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Genomic Location chr10:99079022-99081672[+]
TSS 99079022
Gene Name FRAT1
Ensembl ID ENSG00000165879.7
ENTREZID 10023
Uniprot
Q92837
Protein Name
isoform CRA_a
Frequently rearranged in advanced T-cell lymphomas
Proto-oncogene FRAT1
Expression levels of FRAT1[ENSG00000165879.7]
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