EnhancerDB
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Enhancers that regulate C18orf54[ENSG00000166845.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr18 51771109 51790535 enh4844 51884287 93752
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Placenta Thyroid Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
chr18 51787123 51787305 vista27490 51884287 96982
VISTA
chr18 51788362 51788737 vista27491 51884287 95550
VISTA
chr18 51840925 51845075 enh108701 51884287 39212
Lung (PC-9)
chr18 51860775 51860976 vista27492 51884287 23311
VISTA
chr18 51883843 51884006 vista27493 51884287 281
VISTA
chr18 51910465 51921195 enh4845 51884287 26178
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
chr18 51939565 51945227 enh32697 51884287 55278
Muscle (Myoblast) Astrocyte Muscle (A673) Brain (SK-N-MC)
chr18 51960085 51965115 enh17718 51884287 75798
Placenta
chr18 51964164 51964175 vista27494 51884287 79877
VISTA
Transcript facotrs that regulate C18orf54[ENSG00000166845.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr18 51883776 51884436 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 149 108337201
chr18 51883821 51884257 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 30 108337202
chr18 51883830 51884652 POLR2A UCSC Txn Factor no Conserved 51884287 365 108337203
chr18 51883840 51884474 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 51884287 187 108337204
chr18 51883864 51883879 MEF2A JASPAR yes 51884287 408 42710345
chr18 51883865 51883880 MEF2C JASPAR yes 51884287 407 42710346
chr18 51883866 51883878 MEF2A JASPAR yes 51884287 409 42710347
chr18 51883866 51883878 MEF2B JASPAR yes 51884287 409 42710348
chr18 51883867 51883877 MEF2A JASPAR yes 51884287 410 42710349
chr18 51883868 51883872 YY1 TRANSFAC yes 51884287 415 42710350
chr18 51883871 51883885 E2F7 JASPAR yes 51884287 402 42710351
chr18 51883872 51883880 E2F1 JASPAR yes 51884287 407 42710352
chr18 51883872 51883884 E2F8 JASPAR yes 51884287 403 42710353
chr18 51883875 51883880 SP1 TRANSFAC yes 51884287 407 42710354
chr18 51883875 51883881 SP1 TRANSFAC yes 51884287 406 42710355
chr18 51883879 51883890 NFKB1 JASPAR yes 51884287 397 42710356
chr18 51883880 51883895 HSF1 JASPAR yes 51884287 392 42710357
chr18 51883890 51883900 SP1 JASPAR yes 51884287 387 42710358
chr18 51883911 51884356 CTCF UCSC Txn Factor no Conserved 51884287 69 108337205
chr18 51883912 51883922 NFATC3 JASPAR yes 51884287 365 42710359
chr18 51883914 51883921 NFATC2 JASPAR yes 51884287 366 42710360
chr18 51883933 51883937 LFA1 TRANSFAC yes 51884287 350 42710361
chr18 51883934 51884491 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 51884287 204 108337206
chr18 51883935 51884535 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 51884287 248 108337207
chr18 51883940 51884316 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 51884287 29 108337208
chr18 51883947 51884287 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 51884287 0 108337209
chr18 51883947 51884623 PHF8 UCSC Txn Factor no Conserved 51884287 336 108337210
chr18 51883955 51884287 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 51884287 0 108337211
chr18 51883956 51883968 TGIF2 JASPAR yes 51884287 319 42710362
chr18 51883974 51884474 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 187 108337212
chr18 51883975 51884335 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 48 108337213
chr18 51883976 51884540 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 253 108337214
chr18 51883977 51884307 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 20 108337215
chr18 51883978 51883989 E2F6 JASPAR yes 51884287 298 42710363
chr18 51883979 51884000 ZNF263 JASPAR yes 51884287 287 42710364
chr18 51883981 51884002 ZNF263 JASPAR yes 51884287 285 42710365
chr18 51883982 51883992 ZNF740 JASPAR yes 51884287 295 42710366
chr18 51883985 51883991 MZF1 JASPAR yes 51884287 296 42710367
chr18 51883991 51884001 SP1 JASPAR yes 51884287 286 42710368
chr18 51883993 51884383 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 51884287 96 108337216
chr18 51883996 51884380 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 51884287 93 108337217
chr18 51883997 51884003 SP1 TRANSFAC yes 51884287 284 42710369
chr18 51883999 51884363 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 51884287 76 108337218
SNPs associated with C18orf54[ENSG00000166845.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr18 52447466 rs7228686 C T 535878 Heart 0.0185769 5265187
chr18 52697211 rs79052052 G A 785623 Adrenal 0.224912 5265998
Details of C18orf54[ENSG00000166845.9]
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Genomic Location chr18:51884287-51911588[+]
TSS 51884287
Gene Name C18orf54
Ensembl ID ENSG00000166845.9
ENTREZID 162681
Uniprot
I7GY12
I7HAS0
Q8IYD9
Protein Name
Chromosome 18 open reading frame 54
Lung adenoma susceptibility protein 2
Expression levels of C18orf54[ENSG00000166845.9]
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