EnhancerDB
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  3. SEMA4C[ENSG00000168758.6]
Enhancers that regulate SEMA4C[ENSG00000168758.6]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 97426265 97442177 enh5715 97536494 94317
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Heart
chr2 97456733 97460883 enh65294 97536494 75611
Heart
chr2 97464805 97470155 enh107801 97536494 66339
Blood (T-cell)
chr2 97472369 97472711 vista32380 97536494 63783
VISTA
chr2 97485225 97489375 enh53197 97536494 47119
Large Intestine
chr2 97522669 97523105 vista32381 97536494 13389
VISTA
chr2 97540190 97540589 vista32382 97536494 3696
VISTA
chr2 97544025 97563599 enh18736 97536494 7531
Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Lung (PC-9) Stomach Muscle (A673) Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Thymus Heart
chr2 97547885 97548242 vista32383 97536494 11391
VISTA
chr2 97551553 97551756 vista32384 97536494 15059
VISTA
chr2 97554359 97554681 vista32385 97536494 17865
VISTA
chr2 97557375 97557484 vista32386 97536494 20881
VISTA
chr2 97561594 97561991 vista32387 97536494 25100
VISTA
chr2 97565299 97565614 vista32388 97536494 28805
VISTA
chr2 97570515 97586615 enh18737 97536494 34021
Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Muscle (Myoblast) Pancreas Uterus Thymus Heart
chr2 97579294 97579390 vista32389 97536494 42800
VISTA
chr2 97587789 97588030 vista32390 97536494 51295
VISTA
chr2 97588585 97594835 enh99689 97536494 52091
Uterus
chr2 97604825 97608975 enh107802 97536494 68331
Blood (T-cell)
chr2 97614285 97622535 enh44835 97536494 77791
Stomach Muscle (Myotube) Uterus Heart
chr2 97624225 97632635 enh48309 97536494 87731
Blood (T-cell) Thymus Large Intestine Epithelial (MCF-7)
Transcript facotrs that regulate SEMA4C[ENSG00000168758.6]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr2 97540091 97540556 RELA UCSC Txn Factor no Conserved 97536494 3597 108433254
chr2 97540222 97540236 STAT1 JASPAR yes 97536494 3728 22096081
chr2 97540222 97540237 STAT2 JASPAR yes 97536494 3728 22096082
chr2 97540227 97540238 NFKB1 JASPAR yes 97536494 3733 22096083
chr2 97540228 97540238 NFKB1 JASPAR yes 97536494 3734 22096084
chr2 97540228 97540238 RELA JASPAR yes 97536494 3734 22096085
chr2 97540228 97540238 REL JASPAR yes 97536494 3734 22096086
chr2 97540228 97540239 NFKB1 JASPAR yes 97536494 3734 22096087
chr2 97540240 97540248 FOXO3 JASPAR yes 97536494 3746 22096088
chr2 97540259 97540280 IRF1 JASPAR yes 97536494 3765 22096089
chr2 97540261 97540272 FLI1 JASPAR yes 97536494 3767 22096090
chr2 97540261 97540274 ELF3 JASPAR yes 97536494 3767 22096091
chr2 97540262 97540272 ETV6 JASPAR yes 97536494 3768 22096092
chr2 97540262 97540273 ELF5 JASPAR yes 97536494 3768 22096093
chr2 97540262 97540273 ETV2 JASPAR yes 97536494 3768 22096094
chr2 97540262 97540274 EHF JASPAR yes 97536494 3768 22096095
chr2 97540262 97540274 ELF1 JASPAR yes 97536494 3768 22096096
chr2 97540262 97540274 ELF4 JASPAR yes 97536494 3768 22096097
chr2 97540262 97540275 ELF1 JASPAR yes 97536494 3768 22096098
chr2 97540262 97540276 SPI1 JASPAR yes 97536494 3768 22096099
chr2 97540262 97540276 SPIC JASPAR yes 97536494 3768 22096100
chr2 97540263 97540270 SPI1 JASPAR yes 97536494 3769 22096101
chr2 97540263 97540271 EHF JASPAR yes 97536494 3769 22096102
chr2 97540265 97540272 SPIB JASPAR yes 97536494 3771 22096103
chr2 97540266 97540281 NR2C2 JASPAR yes 97536494 3772 22096104
chr2 97540271 97540282 ESRRA JASPAR yes 97536494 3777 22096105
chr2 97540271 97540282 ESRRB JASPAR yes 97536494 3777 22096106
chr2 97540278 97540284 NFIC JASPAR yes 97536494 3784 22096107
chr2 97540285 97540299 TCF7L2 JASPAR yes 97536494 3791 22096108
chr2 97540285 97540300 LEF1 JASPAR yes 97536494 3791 22096109
chr2 97540290 97540296 SOX10 JASPAR yes 97536494 3796 22096110
chr2 97540293 97540308 PRDM1 JASPAR yes 97536494 3799 22096111
chr2 97540298 97540309 NFKB1 JASPAR yes 97536494 3804 22096112
chr2 97540301 97540315 TCF7L2 JASPAR yes 97536494 3807 22096113
chr2 97540301 97540316 NR2C2 JASPAR yes 97536494 3807 22096114
chr2 97540302 97540316 RXRB JASPAR yes 97536494 3808 22096115
chr2 97540302 97540316 RXRG JASPAR yes 97536494 3808 22096116
chr2 97540305 97540311 TCF1 TRANSFAC yes 97536494 3811 22096117
chr2 97540311 97540321 REL JASPAR yes 97536494 3817 22096118
chr2 97540311 97540322 NFKB1 JASPAR yes 97536494 3817 22096119
chr2 97540313 97540330 BCL6B JASPAR yes 97536494 3819 22096120
chr2 97540314 97540319 H4TF1 TRANSFAC yes 97536494 3820 22096121
chr2 97540318 97540337 RFX2 JASPAR yes 97536494 3824 22096122
chr2 97540356 97540360 NFE TRANSFAC yes 97536494 3862 22096123
chr2 97540362 97540678 EBF1 UCSC Txn Factor no Conserved 97536494 3868 108433255
chr2 97540382 97540386 LFA1 TRANSFAC yes 97536494 3888 22096124
chr2 97540383 97540398 TFAP2A JASPAR yes 97536494 3889 22096125
chr2 97540386 97540398 TFAP2A JASPAR yes 97536494 3892 22096126
chr2 97540386 97540398 TFAP2B JASPAR yes 97536494 3892 22096127
chr2 97540386 97540398 TFAP2C JASPAR yes 97536494 3892 22096128
chr2 97540387 97540396 TFAP2A JASPAR yes 97536494 3893 22096129
chr2 97540392 97540398 SP1 TRANSFAC yes 97536494 3898 22096130
chr2 97540393 97540398 SP1 TRANSFAC yes 97536494 3899 22096131
chr2 97540394 97540399 SP1 TRANSFAC yes 97536494 3900 22096132
chr2 97540467 97540481 PLAG1 JASPAR yes 97536494 3973 22096133
chr2 97540476 97540487 NFKB1 JASPAR yes 97536494 3982 22096134
chr2 97540487 97540500 TFAP2A JASPAR yes 97536494 3993 22096135
chr2 97540490 97540510 PPARG JASPAR yes 97536494 3996 22096136
chr2 97540495 97540499 LFA1 TRANSFAC yes 97536494 4001 22096137
chr2 97540496 97540506 TFEB JASPAR yes 97536494 4002 22096138
chr2 97540496 97540506 TFEC JASPAR yes 97536494 4002 22096139
chr2 97540496 97540507 USF1 JASPAR yes 97536494 4002 22096140
chr2 97540496 97540507 USF2 JASPAR yes 97536494 4002 22096141
chr2 97540501 97540512 NFE2L2 JASPAR yes 97536494 4007 22096142
chr2 97540508 97540529 IRF1 JASPAR yes 97536494 4014 22096143
chr2 97540512 97540526 STAT1 JASPAR yes 97536494 4018 22096144
chr2 97540512 97540527 STAT2 JASPAR yes 97536494 4018 22096145
chr2 97540529 97540533 NFE TRANSFAC yes 97536494 4035 22096146
chr2 97540544 97540553 NFIX JASPAR yes 97536494 4050 22096147
chr2 97540545 97540551 NFIC JASPAR yes 97536494 4051 22096148
chr2 97540549 97540569 ESR1 JASPAR yes 97536494 4055 22096149
chr2 97540552 97540570 ESR1 JASPAR yes 97536494 4058 22096150
chr2 97540553 97540571 ESR2 JASPAR yes 97536494 4059 22096151
chr2 97540554 97540569 ESR2 JASPAR yes 97536494 4060 22096152
chr2 97540577 97540587 MZF1 JASPAR yes 97536494 4083 22096153
SNPs associated with SEMA4C[ENSG00000168758.6], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 98338026 rs112900592 G A 801532 Pancreas 0.00298786 5903045
chr2 97535233 rs573303656 G A 0 Breast 0.359661 5901637
chr2 97535233 rs573303656 G A 0 Ovary 0.558016 5901637
chr2 96869353 rs145162712 A T 656100 Stomach 0.108213 5899614
Details of SEMA4C[ENSG00000168758.6]
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Genomic Location chr2:97525453-97536494[-]
TSS 97536494
Gene Name SEMA4C
Ensembl ID ENSG00000168758.6
ENTREZID 54910
Uniprot
Q9C0C4
Protein Name
Putative uncharacterized protein SEMA4C
SEMA4C protein
Semaphorin-4C
Expression levels of SEMA4C[ENSG00000168758.6]
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