EnhancerDB
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Enhancers that regulate SMAD1[ENSG00000170365.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr4 146306325 146311435 enh83370 146402346 90911
Prostate (PC-3) Peripheral Blood (MM.1S)
chr4 146315805 146319955 enh55019 146402346 82391
Large Intestine
chr4 146323976 146328242 enh45744 146402346 74104
Muscle (Myotube)
chr4 146339865 146346735 enh55020 146402346 55611
Large Intestine
chr4 146371185 146377195 enh83371 146402346 25151
Prostate (PC-3)
chr4 146406505 146411735 enh8248 146402346 4159
Brain (SK-N-MC) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422)
chr4 146408898 146409228 vista46100 146402346 6552
VISTA
chr4 146412385 146416955 enh77439 146402346 10039
Muscle (A673) Stomach
chr4 146417645 146424735 enh48886 146402346 15299
Peripheral Blood (MM.1S) Uterus Thymus
chr4 146426805 146431199 enh55021 146402346 24459
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Blood (OCI-LY7) Lung (PC-9) Spleen Uterus Stomach
chr4 146439485 146446566 enh59395 146402346 37139
Skin (Keratinocyte) Prostate (PC-3) Peripheral Blood (MM.1S) Blood (OCI-LY7)
chr4 146450343 146458635 enh45745 146402346 47997
Large Intestine Muscle (A673) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube)
chr4 146484625 146488775 enh113764 146402346 82279
Brain (SK-N-MC)
Transcript facotrs that regulate SMAD1[ENSG00000170365.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr4 146406769 146406784 MEF2C JASPAR yes 146402346 4423 93398179
chr4 146406770 146406782 MEF2A JASPAR yes 146402346 4424 93398180
chr4 146406770 146406782 MEF2B JASPAR yes 146402346 4424 93398181
chr4 146406770 146406782 MEF2D JASPAR yes 146402346 4424 93398182
chr4 146406771 146406784 DUXA JASPAR yes 146402346 4425 93398183
chr4 146406772 146406783 PROP1 JASPAR yes 146402346 4426 93398184
chr4 146406774 146406785 HOXA10 JASPAR yes 146402346 4428 93398185
chr4 146406784 146406787 MYB TRANSFAC yes 146402346 4438 93398186
chr4 146406784 146406799 AR JASPAR yes 146402346 4438 93398187
chr4 146406786 146406796 MSC JASPAR yes 146402346 4440 93398188
chr4 146406796 146406811 MEF2C JASPAR yes 146402346 4450 93398189
chr4 146406797 146406812 MEF2A JASPAR yes 146402346 4451 93398190
chr4 146406808 146406814 HiNF-A TRANSFAC yes 146402346 4462 93398191
chr4 146406827 146406832 MYC TRANSFAC yes 146402346 4481 93398192
chr4 146406832 146406845 HSF4 JASPAR yes 146402346 4486 93398193
chr4 146406841 146406846 GATA2 JASPAR yes 146402346 4495 93398194
chr4 146406850 146406864 STAT1 JASPAR yes 146402346 4504 93398195
chr4 146406851 146406863 IRF1 JASPAR yes 146402346 4505 93398196
chr4 146406870 146406882 FOXI1 JASPAR yes 146402346 4524 93398197
chr4 146406871 146406885 FOXF2 JASPAR yes 146402346 4525 93398198
chr4 146406871 146406885 ONECUT3 JASPAR yes 146402346 4525 93398199
chr4 146406871 146406887 POU4F2 JASPAR yes 146402346 4525 93398200
chr4 146406871 146406887 POU4F3 JASPAR yes 146402346 4525 93398201
chr4 146406873 146406877 YY1 TRANSFAC yes 146402346 4527 93398202
chr4 146406875 146406887 MEF2A JASPAR yes 146402346 4529 93398203
chr4 146406875 146406887 MEF2B JASPAR yes 146402346 4529 93398204
chr4 146406875 146406887 MEF2D JASPAR yes 146402346 4529 93398205
chr4 146406876 146406886 MEF2A JASPAR yes 146402346 4530 93398206
chr4 146406898 146406909 PHOX2A JASPAR yes 146402346 4552 93398207
chr4 146406898 146406909 PROP1 JASPAR yes 146402346 4552 93398208
chr4 146406939 146406942 MYB TRANSFAC yes 146402346 4593 93398209
chr4 146406977 146406986 SOX9 JASPAR yes 146402346 4631 93398210
chr4 146406978 146406993 FOXP1 JASPAR yes 146402346 4632 93398211
chr4 146406979 146406988 SRY JASPAR yes 146402346 4633 93398212
chr4 146406979 146406990 FOXP2 JASPAR yes 146402346 4633 93398213
chr4 146406979 146406991 FOXC2 JASPAR yes 146402346 4633 93398214
chr4 146406980 146406988 FOXG1 JASPAR yes 146402346 4634 93398215
chr4 146406980 146406988 FOXO3 JASPAR yes 146402346 4634 93398216
chr4 146406985 146406989 TEAD2 TRANSFAC yes 146402346 4639 93398217
chr4 146407001 146407005 YY1 TRANSFAC yes 146402346 4655 93398218
chr4 146407023 146407030 NKX3-1 JASPAR yes 146402346 4677 93398219
chr4 146407029 146407038 SOX9 JASPAR yes 146402346 4683 93398220
chr4 146407041 146407045 YY1 TRANSFAC yes 146402346 4695 93398221
chr4 146407046 146407061 FOXP1 JASPAR yes 146402346 4700 93398222
chr4 146407049 146407063 STAT1 JASPAR yes 146402346 4703 93398223
chr4 146407049 146407064 STAT2 JASPAR yes 146402346 4703 93398224
chr4 146407062 146407077 AR JASPAR yes 146402346 4716 93398225
chr4 146407066 146407080 JUN JASPAR yes 146402346 4720 93398226
chr4 146407069 146407080 FOSL2 JASPAR yes 146402346 4723 93398227
chr4 146407069 146407080 JUNB JASPAR yes 146402346 4723 93398228
chr4 146407070 146407081 FOS JASPAR yes 146402346 4724 93398229
chr4 146407071 146407085 JUN JASPAR yes 146402346 4725 93398230
chr4 146407079 146407084 GATA1 TRANSFAC yes 146402346 4733 93398231
chr4 146407113 146407118 H4TF1 TRANSFAC yes 146402346 4767 93398232
chr4 146407131 146407136 GATA2 JASPAR yes 146402346 4785 93398233
chr4 146407168 146407178 HMBOX1 JASPAR yes 146402346 4822 93398234
chr4 146407170 146407173 MYB TRANSFAC yes 146402346 4824 93398235
chr4 146407202 146407220 MAFF JASPAR yes 146402346 4856 93398236
chr4 146407211 146407220 SOX9 JASPAR yes 146402346 4865 93398237
chr4 146407234 146407254 TP63 JASPAR yes 146402346 4888 93398238
chr4 146407235 146407253 TP73 JASPAR yes 146402346 4889 93398239
chr4 146407236 146407251 TP53 JASPAR yes 146402346 4890 93398240
chr4 146407242 146407262 TP53 JASPAR yes 146402346 4896 93398241
chr4 146407244 146407264 TP63 JASPAR yes 146402346 4898 93398242
chr4 146407245 146407263 TP53 JASPAR yes 146402346 4899 93398243
chr4 146407245 146407263 TP63 JASPAR yes 146402346 4899 93398244
chr4 146407245 146407263 TP73 JASPAR yes 146402346 4899 93398245
chr4 146407246 146407261 TP53 JASPAR yes 146402346 4900 93398246
chr4 146407247 146407262 TP53 JASPAR yes 146402346 4901 93398247
chr4 146407259 146407270 FOXH1 JASPAR yes 146402346 4913 93398248
chr4 146407263 146407267 YY1 TRANSFAC yes 146402346 4917 93398249
chr4 146407272 146407287 MEF2C JASPAR yes 146402346 4926 93398250
chr4 146407273 146407288 MEF2A JASPAR yes 146402346 4927 93398251
chr4 146407274 146407286 MEF2A JASPAR yes 146402346 4928 93398252
chr4 146407274 146407286 MEF2B JASPAR yes 146402346 4928 93398253
chr4 146407274 146407286 MEF2D JASPAR yes 146402346 4928 93398254
chr4 146407275 146407285 MEF2A JASPAR yes 146402346 4929 93398255
chr4 146407278 146407289 PROP1 JASPAR yes 146402346 4932 93398256
chr4 146407312 146407316 NFE TRANSFAC yes 146402346 4966 93398257
chr4 146407312 146407317 GATA1 TRANSFAC yes 146402346 4966 93398258
chr4 146407312 146407318 GATA3 JASPAR yes 146402346 4966 93398259
chr4 146407319 146407323 NFE TRANSFAC yes 146402346 4973 93398260
chr4 146407343 146407358 PRDM1 JASPAR yes 146402346 4997 93398261
chr4 146407346 146407351 ETS2 TRANSFAC yes 146402346 5000 93398262
SNPs associated with SMAD1[ENSG00000170365.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr4 146544530 rs143930325 A G 65299 Esophagus 0.289124 7862414
chr4 146345170 rs72722160 A G 57176 Esophagus 0.240411 7861715
chr4 146832259 rs72725711 A G 353028 Esophagus 0.374521 7863987
chr4 146199017 rs62345155 G A 203329 Heart 0.0758298 7860985
chr4 146201555 rs10024317 T C,G 200791 Uterus 0.494518 7861008
Details of SMAD1[ENSG00000170365.5]
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Genomic Location chr4:146402346-146479231[+]
TSS 146402346
Gene Name SMAD1
Ensembl ID ENSG00000170365.5
ENTREZID 4086
Uniprot
Q15797
Protein Name
Mothers against decapentaplegic homolog 1
Expression levels of SMAD1[ENSG00000170365.5]
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