EnhancerDB
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Enhancers that regulate SLC30A1[ENSG00000170385.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 211656681 211660831 enh64162 211752084 91253
Heart
chr1 211662962 211663302 vista4963 211752084 88782
VISTA
chr1 211673165 211677615 enh98605 211752084 74469
Uterus Stomach
chr1 211685199 211707748 enh12631 211752084 44336
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (OCI-LY7) Placenta Peripheral Blood (MM.1S) Uterus Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9)
chr1 211688648 211688771 vista4964 211752084 63313
VISTA
chr1 211702766 211702975 vista4965 211752084 49109
VISTA
chr1 211712804 211713120 vista4966 211752084 38964
VISTA
chr1 211713164 211718695 enh12632 211752084 33389
Large Intestine Esophagus Placenta Thyroid Lung (PC-9) Pancreas (Panc1) Heart Epithelial (MCF-7)
chr1 211719605 211727444 enh12633 211752084 24640
Bone Marrow (K562) Cervix (HeLa-S3) Prostate (RWPE1) Large Intestine Placenta Lung (PC-9) Heart
chr1 211727785 211735615 enh12634 211752084 16469
Bone Marrow (K562) Placenta Large Intestine
chr1 211753366 211753524 vista4967 211752084 1282
VISTA
chr1 211754949 211755173 vista4968 211752084 2865
VISTA
chr1 211760169 211767916 enh27466 211752084 8085
Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
chr1 211765642 211765767 vista4969 211752084 13558
VISTA
chr1 211772625 211795095 enh907 211752084 20541
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 211780151 211780642 vista4970 211752084 28067
VISTA
chr1 211786767 211786829 vista4971 211752084 34683
VISTA
chr1 211798651 211830775 enh12635 211752084 46567
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Bone (Osteoblast) Muscle (A673) Placenta Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Heart
chr1 211823764 211823781 vista4972 211752084 71680
VISTA
chr1 211837893 211837920 vista4973 211752084 85809
VISTA
chr1 211841432 211841643 vista4974 211752084 89348
VISTA
Transcript facotrs that regulate SLC30A1[ENSG00000170385.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 211750848 211753622 POLR2A UCSC Txn Factor no Conserved 211752084 1236 107867393
chr1 211752877 211753367 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 211752084 793 107867394
chr1 211752881 211753405 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 797 107867395
chr1 211752886 211753402 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 802 107867396
chr1 211752910 211753454 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 826 107867397
chr1 211752919 211753495 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 835 107867398
chr1 211752920 211753536 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 836 107867399
chr1 211752929 211753373 ZBTB33 GTRD no Brain (SK-N-SH) 211752084 845 107867400
chr1 211752931 211754263 ZNF274 GTRD no Bone Marrow (K562) 211752084 847 107867401
chr1 211752943 211753447 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 859 107867402
chr1 211752999 211753412 ZNF274 GTRD no Bone Marrow (K562) 211752084 915 107867403
chr1 211753048 211753916 ZNF274 GTRD no Bone Marrow (K562) 211752084 964 107867404
chr1 211753060 211753420 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 976 107867405
chr1 211753063 211753399 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 979 107867406
chr1 211753078 211753478 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 994 107867407
chr1 211753094 211753422 ZNF274 GTRD no Bone Marrow (K562) 211752084 1010 107867408
chr1 211753125 211753489 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 1041 107867409
chr1 211753126 211753462 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 1042 107867410
chr1 211753128 211753418 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 1044 107867411
chr1 211753173 211753429 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 1089 107867412
chr1 211753178 211753603 ZNF274 GTRD no Bone Marrow (K562) 211752084 1094 107867413
chr1 211753200 211753550 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 211752084 1116 107867414
chr1 211753236 211753407 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 1152 107867415
chr1 211753284 211753406 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 211752084 1200 107867416
chr1 211753375 211753387 GRHL1 JASPAR yes 211752084 1291 118451373
chr1 211753378 211753384 PTF TRANSFAC yes 211752084 1294 118451374
chr1 211753385 211753391 MZF1 JASPAR yes 211752084 1301 118451375
chr1 211753393 211753397 TEAD2 TRANSFAC yes 211752084 1309 118451376
chr1 211753393 211753398 TBP TRANSFAC yes 211752084 1309 118451377
chr1 211753413 211754119 ZNF274 GTRD no Liver (HepG2) 211752084 1329 107867417
chr1 211753419 211753430 NFKB1 JASPAR yes 211752084 1335 118451378
chr1 211753428 211753441 SMAD2 JASPAR yes 211752084 1344 118451379
chr1 211753462 211753465 MYB TRANSFAC yes 211752084 1378 118451380
chr1 211753465 211753469 YY1 TRANSFAC yes 211752084 1381 118451381
chr1 211753465 211753480 MEF2A JASPAR yes 211752084 1381 118451382
chr1 211753466 211753481 MEF2C JASPAR yes 211752084 1382 118451383
chr1 211753466 211753987 ZNF274 GTRD no Liver (HepG2) 211752084 1382 107867418
chr1 211753467 211753479 FOXC2 JASPAR yes 211752084 1383 118451384
chr1 211753467 211753479 MEF2A JASPAR yes 211752084 1383 118451385
chr1 211753467 211753479 MEF2B JASPAR yes 211752084 1383 118451386
chr1 211753467 211753479 MEF2D JASPAR yes 211752084 1383 118451387
chr1 211753468 211753478 MEF2A JASPAR yes 211752084 1384 118451388
chr1 211753469 211753473 YY1 TRANSFAC yes 211752084 1385 118451389
chr1 211753469 211754340 ZNF274 GTRD no Liver (HepG2) 211752084 1385 107867419
chr1 211753471 211754106 ZNF274 GTRD no Liver (HepG2) 211752084 1387 107867420
chr1 211753499 211753518 RFX2 JASPAR yes 211752084 1415 118451390
chr1 211753501 211753516 RFX5 JASPAR yes 211752084 1417 118451391
chr1 211753503 211753519 RFX5 JASPAR yes 211752084 1419 118451392
chr1 211753508 211753518 MZF1 JASPAR yes 211752084 1424 118451393
chr1 211753511 211753516 TFAP2A TRANSFAC yes 211752084 1427 118451394
chr1 211753511 211753517 MZF1 JASPAR yes 211752084 1427 118451395
chr1 211754740 211755219 TCF7L2 GTRD no Colon (HCT116) 211752084 2656 107867421
chr1 211754791 211755226 TCF7L2 GTRD no Colon (HCT116) 211752084 2707 107867422
chr1 211754989 211755002 TFAP2A JASPAR yes 211752084 2905 118451396
chr1 211754989 211755002 TFAP2B JASPAR yes 211752084 2905 118451397
chr1 211754989 211755002 TFAP2C JASPAR yes 211752084 2905 118451398
chr1 211754990 211755001 EBF1 JASPAR yes 211752084 2906 118451399
chr1 211755014 211755020 JUN TRANSFAC yes 211752084 2930 118451400
chr1 211755018 211755030 PROX1 JASPAR yes 211752084 2934 118451401
chr1 211755026 211755047 IRF1 JASPAR yes 211752084 2942 118451402
chr1 211755028 211755043 PRDM1 JASPAR yes 211752084 2944 118451403
chr1 211755028 211755043 STAT2 JASPAR yes 211752084 2944 118451404
chr1 211755029 211755043 STAT1 JASPAR yes 211752084 2945 118451405
chr1 211755064 211755067 MYB TRANSFAC yes 211752084 2980 118451406
chr1 211755076 211755081 GATA2 JASPAR yes 211752084 2992 118451407
chr1 211755081 211755092 BATF JASPAR yes 211752084 2997 118451408
chr1 211755091 211755107 SOX8 JASPAR yes 211752084 3007 118451409
chr1 211755091 211755107 ZNF143 JASPAR yes 211752084 3007 118451410
chr1 211755106 211755121 LEF1 JASPAR yes 211752084 3022 118451411
chr1 211755121 211755139 SRF JASPAR yes 211752084 3037 118451412
chr1 211755126 211755137 STAT3 JASPAR yes 211752084 3042 118451413
chr1 211755131 211755138 NFATC2 JASPAR yes 211752084 3047 118451414
chr1 211755143 211755149 NFIC JASPAR yes 211752084 3059 118451415
chr1 211755145 211755149 H1TF2 TRANSFAC yes 211752084 3061 118451416
chr1 211755145 211755149 NFE TRANSFAC yes 211752084 3061 118451417
chr1 211755145 211755149 SRF TRANSFAC yes 211752084 3061 118451418
chr1 211755147 211755159 POU2F1 JASPAR yes 211752084 3063 118451419
chr1 211755154 211755160 TCF4 TRANSFAC yes 211752084 3070 118451420
SNPs associated with SLC30A1[ENSG00000170385.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 211643672 rs17017513 A G 101238 Esophagus 0.213669 916106
chr1 211741269 rs28403071 A G 3641 Esophagus 0.134337 917169
chr1 212634583 rs675065 A G 882499 Esophagus 0.28875 923005
chr1 211741269 rs28403071 A G 3641 Heart 0.36183 917169
chr1 210802912 rs6683486 C G 941998 Heart 0.128875 913157
chr1 212375359 rs1967115 G A 623275 Pancreas 0.0826638 921297
chr1 211301580 rs140510131 G T 443330 Ovary 0.303138 914581
chr1 211762015 rs76041831 C T 9931 Uterus 0.428345 917268
chr1 211762097 rs143270332 G C 10013 Liver 0.873468 917269
chr1 211700658 rs1614866 G A 44252 Adrenal 0.295848 916651
Details of SLC30A1[ENSG00000170385.9]
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Genomic Location chr1:211744910-211752084[-]
TSS 211752084
Gene Name SLC30A1
Ensembl ID ENSG00000170385.9
ENTREZID 7779
Uniprot
Q9Y6M5
Protein Name
Putative zinc transporter 1
Zinc transporter 1
Expression levels of SLC30A1[ENSG00000170385.9]
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