EnhancerDB
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Enhancers that regulate C9orf16[ENSG00000171159.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr9 130801965 130822635 enh26035 130922539 99904
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr9 130834459 130834744 vista63515 130922539 87795
VISTA
chr9 130834970 130835273 vista63516 130922539 87266
VISTA
chr9 130837305 130853095 enh26036 130922539 69444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr9 130844598 130844860 vista63517 130922539 77679
VISTA
chr9 130853145 130859695 enh26037 130922539 62844
Bone Marrow (K562) Brain (SK-N-MC) Adrenal Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr9 130875469 130882795 enh26038 130922539 39744
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Liver Blood (GM12878) Placenta Pancreas Spleen Epithelial (MCF-7)
chr9 130885365 130889515 enh10998 130922539 33024
Blood (Karpas-422)
chr9 130895845 130902535 enh26039 130922539 20004
Prostate (PC-3) Prostate (RWPE1) Astrocyte Placenta Lung (PC-9)
chr9 130898933 130899188 vista63518 130922539 23351
VISTA
chr9 130907941 130908020 vista63519 130922539 14519
VISTA
chr9 130934425 130938575 enh26040 130922539 11886
Placenta
chr9 130972105 130980495 enh42309 130922539 49566
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Astrocyte Muscle (A673) Lung (PC-9) Pancreas Uterus Heart
chr9 130992546 130992666 vista63520 130922539 70007
VISTA
chr9 131002125 131008235 enh26041 130922539 79586
Astrocyte Placenta Uterus Brain (SK-N-SH)
chr9 131007254 131007504 vista63521 130922539 84715
VISTA
Transcript facotrs that regulate C9orf16[ENSG00000171159.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with C9orf16[ENSG00000171159.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr9 131159568 rs12004925 A G 233361 Esophagus 0.00665539 11316049
chr9 130179312 rs112589883 G A 743227 Heart 0.0427759 11310033
chr9 129924786 rs16929638 A C 997753 Heart 0.00556809 11308817
chr9 131123875 rs3003620 C T 197668 Breast 0.0766912 11315816
chr9 130601741 rs41372253 G A 320798 Spleen 0.0753107 11312189
chr9 130791840 rs79058300 G A 130699 Uterus 0.143592 11313953
chr9 130908109 rs878399 G C 14430 Thyroid 5.69508e-08 11315073
chr9 130890449 rs11283643 A AGGTGCGCGGC,AGGTGCGTGGC 32090 Stomach 0.0686178 11314896
Details of C9orf16[ENSG00000171159.4]
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Genomic Location chr9:130922539-130926207[+]
TSS 130922539
Gene Name C9orf16
Ensembl ID ENSG00000171159.4
ENTREZID 79095
Uniprot
Q9BUW7
Protein Name
UPF0184 protein C9orf16
Expression levels of C9orf16[ENSG00000171159.4]
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