EnhancerDB
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Enhancers that regulate SLFNL1[ENSG00000171790.11]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 41379385 41400015 enh87597 41488909 88894
Liver (HepG2) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
chr1 41400705 41424275 enh11780 41488909 64634
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Placenta Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Uterus Stomach
chr1 41431165 41436255 enh26649 41488909 52654
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr1 41467429 41471579 enh61828 41488909 17330
Esophagus
chr1 41494745 41498915 enh92046 41488909 5836
Liver (HepG2)
chr1 41495531 41495820 vista1310 41488909 6622
VISTA
chr1 41501440 41501773 vista1311 41488909 12531
VISTA
chr1 41501908 41501999 vista1312 41488909 12999
VISTA
chr1 41517025 41521175 enh280 41488909 28116
Blood (Karpas-422)
chr1 41564044 41564297 vista1313 41488909 75135
VISTA
chr1 41564845 41570595 enh26650 41488909 75936
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Liver Lung Muscle (A673) Thyroid Spleen Uterus Stomach
chr1 41570885 41578942 enh11781 41488909 81976
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Colon (HCT116) Breast Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
chr1 41586965 41591935 enh26651 41488909 98056
Liver (HepG2) Brain (SK-N-MC) Astrocyte Bone (Osteoblast) Muscle (A673) Uterus
Transcript facotrs that regulate SLFNL1[ENSG00000171790.11]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 41492936 41497619 ZNF274 GTRD no Bone Marrow (K562) 41488909 4027 107802937
SNPs associated with SLFNL1[ENSG00000171790.11], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 41346344 rs11209092 T C 134925 Heart 0.235566 257410
chr1 41805849 rs4660188 T A,G 316940 Pancreas 0.0603386 260447
chr1 41950473 rs6674101 G A,T 461564 Breast 0.384313 262120
chr1 42471007 rs114150213 C T 982098 Ovary 0.404204 266586
chr1 40772203 rs77156129 G C 709066 Uterus 0.470846 254329
chr1 40818235 rs183905740 G A 663034 Lung 0.163525 254593
chr1 40523328 rs3122416 A G 957941 Adrenal 0.262863 253306
Details of SLFNL1[ENSG00000171790.11]
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Genomic Location chr1:41481269-41488909[-]
TSS 41488909
Gene Name SLFNL1
Ensembl ID ENSG00000171790.11
ENTREZID 200172
Uniprot
Q499Z3
A0A140VJU6
Protein Name
Schlafen-like protein 1
Expression levels of SLFNL1[ENSG00000171790.11]
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