EnhancerDB
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Enhancers that regulate BANF1[ENSG00000175334.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 65670692 65670945 vista10639 65769550 98605
VISTA
chr11 65674705 65685435 enh14005 65769550 84115
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Uterus Heart
chr11 65678943 65679154 vista10640 65769550 90396
VISTA
chr11 65679250 65679576 vista10641 65769550 89974
VISTA
chr11 65683105 65683625 vista10642 65769550 85925
VISTA
chr11 65691605 65703755 enh47496 65769550 65795
Bone Marrow (K562) Blood (T-cell) Thyroid Colon (HCT116) Peripheral Blood (MM.1S) Thymus Stomach
chr11 65695608 65695878 vista10643 65769550 73672
VISTA
chr11 65706814 65711675 enh14006 65769550 57875
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Placenta Thyroid Spleen
chr11 65739201 65739551 vista10644 65769550 29999
VISTA
chr11 65739211 65743633 enh89623 65769550 25917
Prostate (RWPE1)
chr11 65752005 65758961 enh1829 65769550 10589
Prostate (RWPE1) Blood (T-cell) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Spleen Thymus Epithelial (MCF-7)
chr11 65782974 65783337 vista10645 65769550 13424
VISTA
chr11 65801525 65805675 enh101264 65769550 31975
Thyroid
chr11 65843537 65857497 enh1830 65769550 73987
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr11 65849089 65849462 vista10646 65769550 79539
VISTA
chr11 65852297 65852657 vista10647 65769550 82747
VISTA
chr11 65862700 65887735 enh1831 65769550 93150
Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript facotrs that regulate BANF1[ENSG00000175334.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with BANF1[ENSG00000175334.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 65740370 rs11227368 C T 29180 Esophagus 0.000791723 2050162
chr11 65742283 rs60109456 A G 27267 Esophagus 4.55295e-12 2050199
chr11 65742283 rs60109456 A G 27267 Esophagus 8.4014e-06 2050199
chr11 65742283 rs60109456 A G 27267 Breast 9.2041e-06 2050199
chr11 65742933 rs649000 T C 26617 Spleen 0.0167501 2050208
chr11 65740468 rs10896070 T C 29082 Ovary 0.323586 2050170
chr11 66735475 rs34306231 G A 963855 Adrenal 0.185728 2054684
Details of BANF1[ENSG00000175334.3]
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Genomic Location chr11:65769550-65771620[+]
TSS 65769550
Gene Name BANF1
Ensembl ID ENSG00000175334.3
ENTREZID 8815
Uniprot
O75531
A0A024R5H0
Protein Name
isoform CRA_a
Barrier to autointegration factor 1
Barrier-to-autointegration factor
Expression levels of BANF1[ENSG00000175334.3]
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