EnhancerDB
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Enhancers that regulate FOXC2[ENSG00000176692.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 86486845 86503395 enh31990 86600857 97462
Astrocyte Cervix (HeLa-S3) Large Intestine Stomach
chr16 86508845 86515335 enh16892 86600857 85522
Placenta Cervix (HeLa-S3) Stomach
chr16 86523025 86527175 enh109738 86600857 73682
Stomach
chr16 86532148 86532503 vista23394 86600857 68354
VISTA
chr16 86541340 86541581 vista23395 86600857 59276
VISTA
chr16 86549385 86555939 enh16893 86600857 44918
Esophagus Cervix (HeLa-S3) Placenta Pancreas
chr16 86587305 86587716 vista23396 86600857 13141
VISTA
chr16 86605943 86606044 vista23397 86600857 5086
VISTA
chr16 86606085 86610269 enh102550 86600857 5228
Bone (Osteoblast)
chr16 86609499 86609840 vista23398 86600857 8642
VISTA
chr16 86615965 86626395 enh31991 86600857 15108
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Epithelial (MCF-7)
chr16 86619952 86620235 vista23399 86600857 19095
VISTA
chr16 86626425 86634395 enh31992 86600857 25568
Astrocyte
chr16 86639865 86655285 enh31993 86600857 39008
Large Intestine Astrocyte Bone (Osteoblast) Lung Pancreas (Panc1) Uterus Pancreas Spleen Neural Stem Cells (H9) Heart
chr16 86653031 86653193 vista23400 86600857 52174
VISTA
chr16 86658765 86671055 enh31994 86600857 57908
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Muscle (A673) Muscle (Myotube) Epithelial (MCF-7)
chr16 86664163 86664323 vista23401 86600857 63306
VISTA
chr16 86685005 86689677 enh31995 86600857 84148
Astrocyte Muscle (Myotube) Bone (Osteoblast) Heart
chr16 86695160 86719108 enh31996 86600857 94303
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Heart
chr16 86698129 86698417 vista23402 86600857 97272
VISTA
chr16 86698644 86698785 vista23403 86600857 97787
VISTA
Transcript facotrs that regulate FOXC2[ENSG00000176692.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 86605828 86606138 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 86600857 4971 108218383
SNPs associated with FOXC2[ENSG00000176692.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 86457670 rs143758385 G A 143187 Esophagus 0.205672 4636946
chr16 85944439 rs391525 A G 656418 Esophagus 0.13555 4630068
chr16 86154355 rs9941308 G C 446502 Heart 0.220583 4633225
chr16 85971882 rs11117419 C A,G 628975 Lung 0.15475 4630608
chr16 86008641 rs4843880 T C,G 592216 Stomach 0.364945 4631352
chr16 85609944 rs77563038 G C 990913 Adrenal 0.373889 4625680
Details of FOXC2[ENSG00000176692.4]
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Genomic Location chr16:86600857-86602539[+]
TSS 86600857
Gene Name FOXC2
Ensembl ID ENSG00000176692.4
ENTREZID 2303
Uniprot
Q99958
Protein Name
Forkhead box C2
Forkhead box protein C2
Truncated forkhead box C2
Expression levels of FOXC2[ENSG00000176692.4]
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