EnhancerDB
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Enhancers that regulate KCNA3[ENSG00000177272.7]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 111122245 111128575 enh558 111217655 89080
Blood (Karpas-422)
chr1 111150705 111165175 enh47224 111217655 52480
Bone Marrow (K562) Brain (SK-N-MC) Blood (T-cell) Stomach Muscle (A673) Peripheral Blood (MM.1S) Pancreas Thymus Epithelial (MCF-7)
chr1 111162611 111162919 vista2911 111217655 54736
VISTA
chr1 111163364 111163623 vista2912 111217655 54032
VISTA
chr1 111168545 111172695 enh94040 111217655 44960
Spleen
chr1 111170436 111170835 vista2913 111217655 46820
VISTA
chr1 111171044 111171183 vista2914 111217655 46472
VISTA
chr1 111177471 111177854 vista2915 111217655 39801
VISTA
chr1 111178912 111179243 vista2916 111217655 38412
VISTA
chr1 111182425 111192295 enh61886 111217655 25360
Esophagus Muscle (A673) Peripheral Blood (MM.1S) Spleen Uterus Blood (T-cell)
chr1 111182665 111183078 vista2917 111217655 34577
VISTA
chr1 111186366 111186880 vista2918 111217655 30775
VISTA
chr1 111188051 111188448 vista2919 111217655 29207
VISTA
chr1 111189973 111190443 vista2920 111217655 27212
VISTA
chr1 111191148 111191392 vista2921 111217655 26263
VISTA
chr1 111191728 111191821 vista2922 111217655 25834
VISTA
chr1 111207085 111207350 vista2923 111217655 10305
VISTA
chr1 111209000 111209250 vista2924 111217655 8405
VISTA
chr1 111211165 111211475 vista2925 111217655 6180
VISTA
chr1 111212876 111213052 vista2926 111217655 4603
VISTA
chr1 111230020 111230418 vista2927 111217655 12365
VISTA
chr1 111249875 111250151 vista2928 111217655 32220
VISTA
chr1 111251861 111252073 vista2929 111217655 34206
VISTA
chr1 111252465 111256615 enh107399 111217655 34810
Blood (T-cell)
chr1 111255928 111256180 vista2930 111217655 38273
VISTA
chr1 111262637 111262920 vista2931 111217655 44982
VISTA
chr1 111265440 111265838 vista2932 111217655 47785
VISTA
chr1 111266753 111271655 enh47225 111217655 49098
Peripheral Blood (MM.1S) Blood (T-cell) Thymus Blood (OCI-LY7)
chr1 111287305 111296982 enh67100 111217655 69650
Neural Stem Cells (H9) Epithelial (MCF-7)
chr1 111309365 111332595 enh12138 111217655 91710
Brain (SK-N-MC) Blood (T-cell) Blood (GM12878) Muscle (A673) Placenta Peripheral Blood (MM.1S) Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
Transcript facotrs that regulate KCNA3[ENSG00000177272.7]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 111211669 111213910 ZNF274 GTRD no Bone Marrow (K562) 111217655 3745 107821562
chr1 111211685 111217482 ZNF274 GTRD no Bone Marrow (K562) 111217655 173 107821563
chr1 111212337 111224682 ZNF274 GTRD no Blood (GM12878) 111217655 0 107821564
chr1 111212356 111213177 ZNF274 GTRD no Bone Marrow (K562) 111217655 4478 107821565
chr1 111212413 111213412 ZNF274 GTRD no Bone Marrow (K562) 111217655 4243 107821566
chr1 111212447 111213317 ZNF274 GTRD no Bone Marrow (K562) 111217655 4338 107821567
chr1 111212461 111218278 ZNF274 GTRD no Blood (GM12878) 111217655 623 107821568
chr1 111212463 111226532 ZNF274 GTRD no Blood (GM12878) 111217655 0 107821569
chr1 111212480 111218411 ZNF274 GTRD no Blood (GM12878) 111217655 756 107821570
chr1 111212481 111218291 ZNF274 GTRD no Blood (GM12878) 111217655 636 107821571
chr1 111212485 111218125 ZNF274 GTRD no Blood (GM12878) 111217655 470 107821572
chr1 111212485 111218316 ZNF274 GTRD no Blood (GM12878) 111217655 661 107821573
chr1 111212568 111213384 ZNF274 GTRD no Blood (GM12878) 111217655 4271 107821574
chr1 111212574 111213073 ZNF274 GTRD no Bone Marrow (K562) 111217655 4582 107821575
chr1 111212592 111213039 ZNF274 GTRD no Bone Marrow (K562) 111217655 4616 107821576
chr1 111212598 111213158 ZNF274 GTRD no Bone Marrow (K562) 111217655 4497 107821577
chr1 111212620 111213037 ZNF274 GTRD no Bone Marrow (K562) 111217655 4618 107821578
chr1 111212722 111218225 ZNF274 GTRD no Blood (GM12878) 111217655 570 107821579
chr1 111212809 111213783 ZNF274 GTRD no Bone Marrow (K562) 111217655 3872 107821580
chr1 111212905 111212910 GATA2 JASPAR yes 111217655 4745 118350427
chr1 111212949 111212956 JUN TRANSFAC yes 111217655 4699 118350428
chr1 111212957 111212971 JUN JASPAR yes 111217655 4684 118350429
chr1 111212959 111212970 BATF JASPAR yes 111217655 4685 118350430
chr1 111212961 111212972 FOS JASPAR yes 111217655 4683 118350431
chr1 111212961 111212972 FOSL1 JASPAR yes 111217655 4683 118350432
chr1 111212962 111212971 JDP2 JASPAR yes 111217655 4684 118350433
chr1 111212969 111212989 TP53 JASPAR yes 111217655 4666 118350434
chr1 111212977 111212982 GATA2 JASPAR yes 111217655 4673 118350435
chr1 111212980 111212984 YY1 TRANSFAC yes 111217655 4671 118350436
chr1 111212988 111212996 RHOXF1 JASPAR yes 111217655 4659 118350437
chr1 111212994 111213008 TCF7L2 JASPAR yes 111217655 4647 118350438
chr1 111212994 111213009 HNF4G JASPAR yes 111217655 4646 118350439
chr1 111212994 111213009 LEF1 JASPAR yes 111217655 4646 118350440
chr1 111212995 111213010 HNF4A JASPAR yes 111217655 4645 118350441
chr1 111212999 111213005 SOX10 JASPAR yes 111217655 4650 118350442
chr1 111213015 111213023 HOXA5 JASPAR yes 111217655 4632 118350443
chr1 111213024 111213028 YY1 TRANSFAC yes 111217655 4627 118350444
chr1 111213028 111213040 POU3F1 JASPAR yes 111217655 4615 118350445
chr1 111213028 111213040 POU3F2 JASPAR yes 111217655 4615 118350446
chr1 111213031 111213034 MYB TRANSFAC yes 111217655 4621 118350447
SNPs associated with KCNA3[ENSG00000177272.7], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 111071279 rs1339700 G A 143031 Esophagus 0.135305 553654
chr1 111317827 rs151188353 G A 100172 Esophagus 0.30338 555100
chr1 111177289 rs2821552 A G 37021 Heart 1.63953e-06 554173
chr1 111251885 rs2362812 T A,G 34230 Spleen 0.346294 554666
chr1 112136178 rs7530360 G A,C,T 918523 Uterus 0.285932 559805
chr1 111188355 rs12076724 A C 25955 Thyroid 0.0590157 554279
chr1 110662803 rs78186436 G A 551507 Liver 0.294203 551048
chr1 111042877 rs71671488 T C 171433 Stomach 0.308357 553329
chr1 110536203 rs2298116 A G 678107 Adrenal 0.331636 550312
Details of KCNA3[ENSG00000177272.7]
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Genomic Location chr1:111214310-111217655[-]
TSS 111217655
Gene Name KCNA3
Ensembl ID ENSG00000177272.7
ENTREZID 3738
Uniprot
P22001
Protein Name
Potassium voltage-gated channel subfamily A member 3
Expression levels of KCNA3[ENSG00000177272.7]
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