EnhancerDB
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  3. FAM20C[ENSG00000177706.8]
Enhancers that regulate FAM20C[ENSG00000177706.8]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr7 92825 99075 enh72609 192969 93894
Prostate (PC-3) Neural Stem Cells (H9) Bone (Osteoblast)
chr7 99425 107255 enh23899 192969 85714
Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Placenta Lung (PC-9) Blood (T-cell)
chr7 113076 113191 vista54716 192969 79778
VISTA
chr7 113265 123635 enh23900 192969 69334
Ovary Stomach Muscle (A673) Placenta Lung (PC-9) Neural Stem Cells (H9) Heart
chr7 115581 115835 vista54717 192969 77134
VISTA
chr7 119028 119765 vista54718 192969 73204
VISTA
chr7 127465 133995 enh23901 192969 58974
Muscle (Myoblast) Placenta Stomach Heart
chr7 129626 129879 vista54719 192969 63090
VISTA
chr7 140285 144575 enh56128 192969 48394
Large Intestine Lung Pancreas Heart Stomach
chr7 147045 152715 enh100626 192969 40254
Uterus
chr7 155925 169455 enh23902 192969 23514
Epithelial (MCF-7) Large Intestine Placenta Pancreas Stomach
chr7 171572 171794 vista54720 192969 21175
VISTA
chr7 172825 176975 enh110616 192969 15994
Adrenal
chr7 177265 186006 enh46292 192969 6963
Muscle (Myotube) Bone (Osteoblast) Stomach
chr7 191531 191871 vista54721 192969 1098
VISTA
chr7 195565 202095 enh93574 192969 2596
Liver (HepG2)
chr7 207945 224215 enh23903 192969 14976
Liver (HepG2) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Stomach Placenta Pancreas Muscle (Myotube) Heart
chr7 209915 210076 vista54722 192969 16946
VISTA
chr7 213646 214008 vista54723 192969 20677
VISTA
chr7 224309 228475 enh39827 192969 31340
Esophagus Astrocyte Prostate (PC-3)
chr7 289610 294176 enh46293 192969 96641
Muscle (Myotube)
Transcript facotrs that regulate FAM20C[ENSG00000177706.8]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr7 191532 191536 LFA1 TRANSFAC yes 192969 1433 26007826
chr7 191550 191562 TFAP2A JASPAR yes 192969 1407 26007827
chr7 191551 191562 TFAP2A JASPAR yes 192969 1407 26007828
chr7 191575 191585 SP1 JASPAR yes 192969 1384 26007829
chr7 191614 191631 RARA JASPAR yes 192969 1338 26007830
chr7 191621 191634 DUXA JASPAR yes 192969 1335 26007831
chr7 191626 191629 MYB TRANSFAC yes 192969 1340 26007832
chr7 191645 191664 REST JASPAR yes 192969 1305 26007833
chr7 191680 191692 TAL1 JASPAR yes 192969 1277 26007834
chr7 191681 191693 NHLH1 JASPAR yes 192969 1276 26007835
chr7 191682 191692 FIGLA JASPAR yes 192969 1277 26007836
chr7 191682 191692 MSC JASPAR yes 192969 1277 26007837
chr7 191682 191692 TFAP4 JASPAR yes 192969 1277 26007838
chr7 191682 191694 TAL1 JASPAR yes 192969 1275 26007839
chr7 191721 191733 PKNOX1 JASPAR yes 192969 1236 26007840
chr7 191721 191733 PKNOX2 JASPAR yes 192969 1236 26007841
chr7 191721 191733 TGIF1 JASPAR yes 192969 1236 26007842
chr7 191721 191733 TGIF2 JASPAR yes 192969 1236 26007843
chr7 191737 191747 BHLHE40 JASPAR yes 192969 1222 26007844
chr7 191737 191747 BHLHE41 JASPAR yes 192969 1222 26007845
chr7 191737 191747 MLXIPL JASPAR yes 192969 1222 26007846
chr7 191737 191747 MLX JASPAR yes 192969 1222 26007847
chr7 191737 191747 TFE3 JASPAR yes 192969 1222 26007848
chr7 191738 191758 TP63 JASPAR yes 192969 1211 26007849
chr7 191739 191744 MYC TRANSFAC yes 192969 1225 26007850
chr7 191739 191744 USF1 TRANSFAC yes 192969 1225 26007851
chr7 191739 191744 USF2 TRANSFAC yes 192969 1225 26007852
chr7 191739 191757 TP73 JASPAR yes 192969 1212 26007853
chr7 191740 191755 TP53 JASPAR yes 192969 1214 26007854
chr7 191786 191798 FOXI1 JASPAR yes 192969 1171 26007855
chr7 191790 191796 HiNF-A TRANSFAC yes 192969 1173 26007856
chr7 191796 191816 TP63 JASPAR yes 192969 1153 26007857
chr7 191822 191828 ZNF354C JASPAR yes 192969 1141 26007858
chr7 191832 191843 NRF1 JASPAR yes 192969 1126 26007859
chr7 191844 191864 TP63 JASPAR yes 192969 1105 26007860
chr7 197961 197982 REST JASPAR yes 192969 4992 12376526
SNPs associated with FAM20C[ENSG00000177706.8], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr7 385613 rs142955378 C A,T 84902 Esophagus 0.224869 9560274
chr7 50354 rs6583339 C A 142615 Heart 0.374178 9556221
chr7 391843 rs146246227 C A,T 91132 Pancreas 0.372529 9560400
chr7 386601 rs374588352 C T 85890 Uterus 0.999132 9560293
chr7 642959 rs144189642 G A 342248 Thyroid 0.00748304 9564062
chr7 160740 rs75921010 C T 32229 Stomach 0.33324 9558048
chr7 115340 rs6583345 C T 77629 Adrenal 9.41034e-05 9557332
Details of FAM20C[ENSG00000177706.8]
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Genomic Location chr7:192969-300711[+]
TSS 192969
Gene Name FAM20C
Ensembl ID ENSG00000177706.8
ENTREZID 56975
Uniprot
Q8IXL6
Protein Name
Extracellular serine/threonine protein kinase FAM20C
Expression levels of FAM20C[ENSG00000177706.8]
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