EnhancerDB
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Enhancers that regulate FAM46C[ENSG00000183508.4]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 118075705 118089655 enh49958 118148556 58901
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Epithelial (MCF-7)
chr1 118101865 118109875 enh12199 118148556 38681
Cervix (HeLa-S3) Epithelial (MCF-7) Thyroid Placenta Pancreas Stomach
chr1 118110505 118122715 enh12200 118148556 25841
Prostate (PC-3) Liver (HepG2) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Pancreas Epithelial (MCF-7)
chr1 118130965 118140875 enh12201 118148556 7681
Blood (OCI-LY7) Stomach Thyroid Placenta Peripheral Blood (MM.1S) Pancreas Epithelial (MCF-7)
chr1 118151834 118161315 enh12202 118148556 3278
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Astrocyte Blood (OCI-LY7) Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Blood (T-cell) Heart
chr1 118153815 118153988 vista3097 118148556 5259
VISTA
chr1 118170585 118183715 enh60169 118148556 22029
Prostate (PC-3) Liver Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Heart Epithelial (MCF-7)
chr1 118174879 118175156 vista3098 118148556 26323
VISTA
chr1 118176414 118176771 vista3099 118148556 27858
VISTA
chr1 118185317 118191395 enh43036 118148556 36761
Bone Marrow (K562) Large Intestine Peripheral Blood (MM.1S) Muscle (Myotube) Stomach
chr1 118185712 118185829 vista3100 118148556 37156
VISTA
chr1 118194205 118194506 vista3101 118148556 45649
VISTA
chr1 118194385 118210705 enh589 118148556 45829
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
chr1 118197244 118197521 vista3102 118148556 48688
VISTA
chr1 118197868 118198044 vista3103 118148556 49312
VISTA
chr1 118198788 118199247 vista3104 118148556 50232
VISTA
chr1 118201472 118201699 vista3105 118148556 52916
VISTA
chr1 118203607 118204114 vista3106 118148556 55051
VISTA
chr1 118206889 118207267 vista3107 118148556 58333
VISTA
chr1 118208639 118208762 vista3108 118148556 60083
VISTA
chr1 118211151 118231315 enh12203 118148556 62595
Prostate (PC-3) Brain (SK-N-SH) Astrocyte Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Heart
chr1 118235365 118243315 enh12204 118148556 86809
Bone Marrow (K562) Astrocyte Lung Stomach Placenta Uterus Heart
Transcript facotrs that regulate FAM46C[ENSG00000183508.4]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr1 118152823 118152838 TFAP2C JASPAR yes 118148556 4267 31885707
chr1 118152826 118152837 TFAP2C JASPAR yes 118148556 4270 31885708
chr1 118152828 118152843 HSF1 JASPAR yes 118148556 4272 31885709
chr1 118152853 118152857 YY1 TRANSFAC yes 118148556 4297 31885710
chr1 118152889 118152902 ZBTB18 JASPAR yes 118148556 4333 31885711
chr1 118152931 118152938 JUN TRANSFAC yes 118148556 4375 31885712
chr1 118152947 118152967 RREB1 JASPAR yes 118148556 4391 31885713
chr1 118152948 118152958 SP1 JASPAR yes 118148556 4392 31885714
chr1 118152950 118152965 NR2C2 JASPAR yes 118148556 4394 31885715
chr1 118152950 118152970 RREB1 JASPAR yes 118148556 4394 31885716
chr1 118152958 118152968 ZNF740 JASPAR yes 118148556 4402 31885717
chr1 118152959 118152972 TFAP2A JASPAR yes 118148556 4403 31885718
chr1 118152981 118152984 MYB TRANSFAC yes 118148556 4425 31885719
chr1 118153024 118153030 SOX10 JASPAR yes 118148556 4468 31885720
chr1 118153027 118153032 ETS2 TRANSFAC yes 118148556 4471 31885721
chr1 118153042 118153054 E2F8 JASPAR yes 118148556 4486 31885722
chr1 118153050 118153064 RXRB JASPAR yes 118148556 4494 31885723
chr1 118153050 118153064 RXRG JASPAR yes 118148556 4494 31885724
chr1 118153061 118153076 TFAP2A JASPAR yes 118148556 4505 31885725
chr1 118153061 118153076 TFAP2C JASPAR yes 118148556 4505 31885726
chr1 118153073 118153083 SP1 JASPAR yes 118148556 4517 31885727
chr1 118153097 118153101 YY1 TRANSFAC yes 118148556 4541 31885728
chr1 118153109 118153114 TFAP2A TRANSFAC yes 118148556 4553 31885729
chr1 118153109 118153115 MZF1 JASPAR yes 118148556 4553 31885730
chr1 118153121 118153134 EOMES JASPAR yes 118148556 4565 31885731
chr1 118153123 118153133 TBR1 JASPAR yes 118148556 4567 31885732
chr1 118153123 118153134 TBX20 JASPAR yes 118148556 4567 31885733
chr1 118153123 118153134 TBX2 JASPAR yes 118148556 4567 31885734
chr1 118153124 118153134 TBX21 JASPAR yes 118148556 4568 31885735
chr1 118153125 118153133 MGA JASPAR yes 118148556 4569 31885736
chr1 118153125 118153133 TBX15 JASPAR yes 118148556 4569 31885737
chr1 118153125 118153133 TBX1 JASPAR yes 118148556 4569 31885738
chr1 118153125 118153133 TBX4 JASPAR yes 118148556 4569 31885739
chr1 118153125 118153133 TBX5 JASPAR yes 118148556 4569 31885740
chr1 118153135 118153145 POU6F1 JASPAR yes 118148556 4579 31885741
chr1 118153138 118153142 YY1 TRANSFAC yes 118148556 4582 31885742
chr1 118153142 118153157 LEF1 JASPAR yes 118148556 4586 31885743
chr1 118153146 118153152 LEF1 TRANSFAC yes 118148556 4590 31885744
chr1 118153146 118153152 SOX10 JASPAR yes 118148556 4590 31885745
chr1 118153152 118153164 FOXI1 JASPAR yes 118148556 4596 31885746
chr1 118153155 118153166 FOXA1 JASPAR yes 118148556 4599 31885747
chr1 118153170 118153182 PROX1 JASPAR yes 118148556 4614 31885748
chr1 118153183 118153198 RFX5 JASPAR yes 118148556 4627 31885749
chr1 118153184 118153188 NFE TRANSFAC yes 118148556 4628 31885750
chr1 118153216 118153230 MTF1 JASPAR yes 118148556 4660 31885751
chr1 118153228 118153247 CTCF JASPAR yes 118148556 4672 31885752
chr1 118153287 118153296 SNAI2 JASPAR yes 118148556 4731 31885753
chr1 118153287 118153297 ID4 JASPAR yes 118148556 4731 31885754
chr1 118153287 118153297 TCF3 JASPAR yes 118148556 4731 31885755
chr1 118153287 118153297 TCF4 JASPAR yes 118148556 4731 31885756
chr1 118153297 118153317 RREB1 JASPAR yes 118148556 4741 31885757
chr1 118153319 118153334 MEF2A JASPAR yes 118148556 4763 31885758
chr1 118153320 118153335 MEF2C JASPAR yes 118148556 4764 31885759
chr1 118153321 118153333 MEF2A JASPAR yes 118148556 4765 31885760
chr1 118153321 118153333 MEF2B JASPAR yes 118148556 4765 31885761
chr1 118153321 118153333 MEF2D JASPAR yes 118148556 4765 31885762
chr1 118153323 118153327 YY1 TRANSFAC yes 118148556 4767 31885763
chr1 118153338 118153351 NFKB1 JASPAR yes 118148556 4782 31885764
chr1 118153338 118153351 NFKB2 JASPAR yes 118148556 4782 31885765
chr1 118153341 118153352 CEBPB JASPAR yes 118148556 4785 31885766
chr1 118153344 118153356 YY1 JASPAR yes 118148556 4788 31885767
chr1 118153365 118153384 PAX5 JASPAR yes 118148556 4809 31885768
chr1 118153373 118153386 NR2F1 JASPAR yes 118148556 4817 31885769
chr1 118153413 118153432 PITX2 TRANSFAC yes 118148556 4857 31885770
chr1 118153419 118153432 ZBTB18 JASPAR yes 118148556 4863 31885771
chr1 118153420 118153432 PKNOX1 JASPAR yes 118148556 4864 31885772
chr1 118153420 118153432 TGIF1 JASPAR yes 118148556 4864 31885773
chr1 118153421 118153430 SNAI2 JASPAR yes 118148556 4865 31885774
chr1 118153421 118153431 FIGLA JASPAR yes 118148556 4865 31885775
chr1 118153421 118153431 ID4 JASPAR yes 118148556 4865 31885776
chr1 118153421 118153431 TCF3 JASPAR yes 118148556 4865 31885777
chr1 118153421 118153431 TCF4 JASPAR yes 118148556 4865 31885778
chr1 118153423 118153432 ZEB1 JASPAR yes 118148556 4867 31885779
chr1 118153423 118153433 TBX21 JASPAR yes 118148556 4867 31885780
chr1 118153424 118153432 MGA JASPAR yes 118148556 4868 31885781
chr1 118153424 118153432 TBX15 JASPAR yes 118148556 4868 31885782
chr1 118153424 118153432 TBX1 JASPAR yes 118148556 4868 31885783
chr1 118153424 118153432 TBX4 JASPAR yes 118148556 4868 31885784
chr1 118153424 118153432 TBX5 JASPAR yes 118148556 4868 31885785
chr1 118153424 118153434 TBR1 JASPAR yes 118148556 4868 31885786
chr1 118153424 118153437 SMAD2 JASPAR yes 118148556 4868 31885787
chr1 118153428 118153439 FOSL2 JASPAR yes 118148556 4872 31885788
chr1 118153438 118153447 HIC2 JASPAR yes 118148556 4882 31885789
chr1 118153446 118153450 H1TF2 TRANSFAC yes 118148556 4890 31885790
chr1 118153446 118153450 NFE TRANSFAC yes 118148556 4890 31885791
chr1 118153446 118153450 SRF TRANSFAC yes 118148556 4890 31885792
chr1 118153452 118153473 ZNF263 JASPAR yes 118148556 4896 31885793
chr1 118153466 118153471 ETS2 TRANSFAC yes 118148556 4910 31885794
chr1 118153492 118153507 LEF1 JASPAR yes 118148556 4936 31885795
chr1 118153493 118153507 GATA2 JASPAR yes 118148556 4937 31885796
chr1 118153497 118153505 GATA3 JASPAR yes 118148556 4941 31885797
chr1 118153503 118153509 LEF1 TRANSFAC yes 118148556 4947 31885798
chr1 118153503 118153509 TCF4 TRANSFAC yes 118148556 4947 31885799
chr1 118153505 118153518 DUXA JASPAR yes 118148556 4949 31885800
chr1 118153508 118153513 MYB TRANSFAC yes 118148556 4952 31885801
chr1 118153514 118153529 HNF4G JASPAR yes 118148556 4958 31885802
chr1 118153515 118153530 HNF4A JASPAR yes 118148556 4959 31885803
chr1 118153519 118153525 SOX10 JASPAR yes 118148556 4963 31885804
chr1 118153540 118153547 NKX3-1 JASPAR yes 118148556 4984 31885805
chr1 118153541 118153549 FOXC1 JASPAR yes 118148556 4985 31885806
chr1 118153551 118153561 HOXA13 JASPAR yes 118148556 4995 31885807
chr1 118153551 118153561 HOXB13 JASPAR yes 118148556 4995 31885808
chr1 118153551 118153561 HOXD13 JASPAR yes 118148556 4995 31885809
chr1 118153553 118153557 TEAD2 TRANSFAC yes 118148556 4997 31885810
chr1 118153553 118153558 TBP TRANSFAC yes 118148556 4997 31885811
chr1 118153553 118153559 TFIID TRANSFAC yes 118148556 4997 31885812
chr1 118153553 118153564 FOXC1 JASPAR yes 118148556 4997 31885813
chr1 118153553 118153565 FOXC2 JASPAR yes 118148556 4997 31885814
SNPs associated with FAM46C[ENSG00000183508.4], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 118230226 rs10801979 C T 59232 Esophagus 0.000479978 597229
chr1 117186213 rs61787762 G T 962343 Esophagus 0.198676 590246
chr1 118221833 rs10923384 T A,G 50839 Heart 6.56643e-09 597089
chr1 117191642 rs879616 A G 956914 Pancreas 0.0963245 590279
chr1 118868034 rs115875173 T C 697040 Breast 0.18909 599465
chr1 117879050 rs114405499 G A 269506 Ovary 0.403284 595282
chr1 117596069 rs12022333 T C 552487 Uterus 0.390849 593543
chr1 118881241 rs17038196 A G 710247 Lung 0.0971791 599593
chr1 118151846 rs893230 G A,T 0 Adrenal 0.000319009 596322
Details of FAM46C[ENSG00000183508.4]
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Genomic Location chr1:118148556-118170994[+]
TSS 118148556
Gene Name FAM46C
Ensembl ID ENSG00000183508.4
ENTREZID 54855
Uniprot
Q5VWP2
Protein Name
Protein FAM46C
Expression levels of FAM46C[ENSG00000183508.4]
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