EnhancerDB
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  3. RP1L1[ENSG00000183638.5]
Enhancers that regulate RP1L1[ENSG00000183638.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr8 10484314 10496232 enh24739 10569697 73465
Prostate (PC-3) Prostate (RWPE1) Esophagus Astrocyte Placenta Peripheral Blood (MM.1S) Lung (PC-9) Uterus Heart
chr8 10499065 10503215 enh109155 10569697 66482
Lung (PC-9)
chr8 10505445 10512115 enh63734 10569697 57582
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Colon (HCT116)
chr8 10516505 10520655 enh66501 10569697 49042
Heart
chr8 10573649 10573859 vista58196 10569697 3952
VISTA
chr8 10589745 10596442 enh49367 10569697 20048
Esophagus Skin (Keratinocyte) Thymus
chr8 10589802 10590079 vista58197 10569697 20105
VISTA
chr8 10591008 10591121 vista58198 10569697 21311
VISTA
chr8 10612405 10621175 enh63735 10569697 42708
Bone Marrow (K562) Prostate (PC-3) Prostate (RWPE1) Lung (PC-9) Esophagus Muscle (Myoblast) Pancreas Uterus Epithelial (MCF-7)
chr8 10623700 10638775 enh24740 10569697 54003
Bone Marrow (K562) Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Lung Placenta Uterus Spleen Neural Stem Cells (H9) Heart
chr8 10634302 10634482 vista58199 10569697 64605
VISTA
chr8 10639065 10643457 enh59834 10569697 69368
Skin (Keratinocyte) Prostate (PC-3) Lung (PC-9)
chr8 10644325 10666767 enh24741 10569697 74628
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr8 10659261 10659473 vista58200 10569697 89564
VISTA
Transcript facotrs that regulate RP1L1[ENSG00000183638.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr8 10573498 10574249 POLR2A UCSC Txn Factor no Conserved 10569697 3801 108546544
chr8 10573598 10573954 RCOR1 UCSC Txn Factor no Conserved 10569697 3901 108546545
chr8 10573641 10574021 GATA2 UCSC Txn Factor no Conserved 10569697 3944 108546546
chr8 10573674 10573685 ELK4 JASPAR yes 10569697 3977 68313912
chr8 10573674 10573685 FLI1 JASPAR yes 10569697 3977 68313913
chr8 10573675 10573685 GABPA JASPAR yes 10569697 3978 68313914
chr8 10573683 10573702 REST JASPAR yes 10569697 3986 68313915
chr8 10573692 10573713 ZNF263 JASPAR yes 10569697 3995 68313916
chr8 10573697 10573703 SP1 TRANSFAC yes 10569697 4000 68313917
chr8 10573698 10573703 SP1 TRANSFAC yes 10569697 4001 68313918
chr8 10573698 10573709 E2F4 JASPAR yes 10569697 4001 68313919
chr8 10573699 10573704 SP1 TRANSFAC yes 10569697 4002 68313920
chr8 10573699 10573705 SP1 TRANSFAC yes 10569697 4002 68313921
chr8 10573703 10573708 ETS2 TRANSFAC yes 10569697 4006 68313922
chr8 10573705 10573726 ZNF263 JASPAR yes 10569697 4008 68313923
chr8 10573706 10573711 ETS2 TRANSFAC yes 10569697 4009 68313924
chr8 10573706 10573714 EHF JASPAR yes 10569697 4009 68313925
chr8 10573741 10573751 RELA JASPAR yes 10569697 4044 68313926
chr8 10573771 10573775 LFA1 TRANSFAC yes 10569697 4074 68313927
chr8 10573786 10573797 E2F1 JASPAR yes 10569697 4089 68313928
chr8 10573787 10573798 E2F4 JASPAR yes 10569697 4090 68313929
chr8 10573799 10573805 SP1 TRANSFAC yes 10569697 4102 68313930
chr8 10573800 10573805 SP1 TRANSFAC yes 10569697 4103 68313931
chr8 10573811 10573826 ZIC3 JASPAR yes 10569697 4114 68313932
chr8 10573819 10573825 MAZ TRANSFAC yes 10569697 4122 68313933
chr8 10573823 10573828 SP1 TRANSFAC yes 10569697 4126 68313934
chr8 10573823 10573830 SP1 TRANSFAC yes 10569697 4126 68313935
SNPs associated with RP1L1[ENSG00000183638.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr8 10620758 rs7826392 G A 51061 Breast 7.40527e-06 10277172
chr8 11286069 rs7831885 T C 716372 Uterus 0.286208 10282827
Details of RP1L1[ENSG00000183638.5]
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Genomic Location chr8:10463859-10569697[-]
TSS 10569697
Gene Name RP1L1
Ensembl ID ENSG00000183638.5
ENTREZID 94137
Uniprot
A6NKC6
Protein Name
Retinitis pigmentosa 1-like 1 protein
Expression levels of RP1L1[ENSG00000183638.5]
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