EnhancerDB
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Enhancers that regulate LRRC55[ENSG00000183908.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr11 56848345 56855395 enh57583 56949221 93826
Stomach Lung (A549)
chr11 56866405 56870555 enh94131 56949221 78666
Spleen
chr11 56886145 56900795 enh13933 56949221 48426
Bone Marrow (K562) Placenta Lung (PC-9)
chr11 56909687 56909798 vista10335 56949221 39423
VISTA
chr11 56916125 56920275 enh90895 56949221 28946
Bone Marrow (K562)
chr11 56920285 56927355 enh67804 56949221 21866
Stomach Neural Stem Cells (H9) Lung (PC-9)
chr11 56933065 56937215 enh50824 56949221 12006
Large Intestine
chr11 56962114 56966435 enh64468 56949221 12893
Heart
chr11 56968885 56974834 enh64469 56949221 19664
Heart Lung Pancreas Neural Stem Cells (H9) Stomach
chr11 56970712 56970886 vista10336 56949221 21491
VISTA
chr11 56976265 56984320 enh13934 56949221 27044
Brain (SK-N-SH) Esophagus Astrocyte Lung Lung (A549) Stomach Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Uterus Heart
chr11 56980843 56981208 vista10337 56949221 31622
VISTA
chr11 56991738 56991923 vista10338 56949221 42517
VISTA
chr11 56996334 57000884 enh64470 56949221 47113
Heart
chr11 57008254 57008590 vista10339 56949221 59033
VISTA
chr11 57014589 57021495 enh62157 56949221 65368
Bone Marrow (K562) Esophagus Lung (PC-9) Pancreas Uterus Stomach
chr11 57028694 57033096 enh67805 56949221 79473
Neural Stem Cells (H9)
chr11 57040485 57066955 enh13935 56949221 91264
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr11 57044676 57044864 vista10340 56949221 95455
VISTA
chr11 57045764 57045851 vista10341 56949221 96543
VISTA
Transcript facotrs that regulate LRRC55[ENSG00000183908.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with LRRC55[ENSG00000183908.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr11 57191627 rs111908581 G A 232436 Heart 0.250412 2008942
chr11 57057030 rs17151820 C G 97839 Ovary 0.429755 2008187
chr11 56911496 rs633636 G A 37725 Adrenal 0.264414 2007344
Details of LRRC55[ENSG00000183908.5]
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Genomic Location chr11:56949221-56959191[+]
TSS 56949221
Gene Name LRRC55
Ensembl ID ENSG00000183908.5
ENTREZID 219527
Uniprot
Q6ZSA7
Protein Name
Leucine-rich repeat-containing protein 55
Expression levels of LRRC55[ENSG00000183908.5]
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