EnhancerDB
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  3. C16orf54[ENSG00000185905.3]
Enhancers that regulate C16orf54[ENSG00000185905.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 29649745 29663215 enh69103 29757327 94112
Bone Marrow (K562) Neural Stem Cells (H9) Blood (T-cell) Brain (SK-N-MC)
chr16 29664305 29668455 enh91106 29757327 88872
Bone Marrow (K562)
chr16 29666391 29666471 vista22331 29757327 90856
VISTA
chr16 29683481 29689782 enh3969 29757327 67545
Brain (SK-N-MC) Ovary Blood (OCI-LY7) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myotube) Neural Stem Cells (H9) Thymus
chr16 29694045 29705435 enh3970 29757327 51892
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-MC) Blood (GM12878) Muscle (A673) Placenta Adrenal Blood (Karpas-422) Neural Stem Cells (H9)
chr16 29702683 29703007 vista22332 29757327 54320
VISTA
chr16 29709853 29709969 vista22333 29757327 47358
VISTA
chr16 29709925 29715955 enh47947 29757327 41372
Thymus Blood (OCI-LY7) Peripheral Blood (MM.1S) Blood (T-cell) Stomach
chr16 29712327 29712432 vista22334 29757327 44895
VISTA
chr16 29713855 29714040 vista22335 29757327 43287
VISTA
chr16 29719644 29723982 enh31762 29757327 33345
Pancreas Astrocyte Brain (SK-N-SH) Brain (SK-N-MC)
chr16 29721114 29721129 vista22336 29757327 36198
VISTA
chr16 29730993 29745943 enh16625 29757327 11384
Placenta Neural Stem Cells (H9) Blood (OCI-LY7) Blood (GM12878)
chr16 29746165 29752895 enh47948 29757327 4432
Large Intestine Blood (T-cell) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Epithelial (MCF-7)
chr16 29749958 29750047 vista22337 29757327 7280
VISTA
chr16 29758413 29758569 vista22338 29757327 1086
VISTA
chr16 29763925 29779130 enh16626 29757327 6598
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Thymus Epithelial (MCF-7)
chr16 29796508 29796713 vista22339 29757327 39181
VISTA
chr16 29812565 29818075 enh3971 29757327 55238
Blood (Karpas-422)
chr16 29829554 29835308 enh99324 29757327 72227
Cervix (HeLa-S3) Uterus Bone (Osteoblast)
chr16 29836245 29840795 enh16627 29757327 78918
Placenta Liver (HepG2)
chr16 29836551 29836761 vista22340 29757327 79224
VISTA
chr16 29856513 29856888 vista22341 29757327 99186
VISTA
Transcript facotrs that regulate C16orf54[ENSG00000185905.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 29752332 29752337 GATA2 JASPAR yes 29757327 4990 10280933
chr16 29752346 29752352 GATA3 JASPAR yes 29757327 4975 10280934
chr16 29752355 29752361 GATA3 JASPAR yes 29757327 4966 10280935
chr16 29752358 29752372 ONECUT1 JASPAR yes 29757327 4955 10280936
chr16 29752358 29752372 ONECUT2 JASPAR yes 29757327 4955 10280937
chr16 29752358 29752372 ONECUT3 JASPAR yes 29757327 4955 10280938
chr16 29752361 29752371 CUX1 JASPAR yes 29757327 4956 10280939
chr16 29752361 29752371 CUX2 JASPAR yes 29757327 4956 10280940
chr16 29752365 29752377 FOXI1 JASPAR yes 29757327 4950 10280941
chr16 29752394 29752403 THAP1 JASPAR yes 29757327 4924 10280942
chr16 29752394 29752405 GCM1 JASPAR yes 29757327 4922 10280943
chr16 29752395 29752405 GCM2 JASPAR yes 29757327 4922 10280944
chr16 29752405 29752409 H4TF2 TRANSFAC yes 29757327 4918 10280945
chr16 29752427 29752431 H4TF2 TRANSFAC yes 29757327 4896 10280946
chr16 29752429 29752443 PLAG1 JASPAR yes 29757327 4884 10280947
chr16 29752458 29752464 SOX10 JASPAR yes 29757327 4863 10280948
chr16 29752474 29752478 YY1 TRANSFAC yes 29757327 4849 10280949
chr16 29752496 29752505 ZEB1 JASPAR yes 29757327 4822 10280950
chr16 29752499 29752504 USF2 TRANSFAC yes 29757327 4823 10280951
chr16 29752513 29752526 SCRT2 JASPAR yes 29757327 4801 10280952
chr16 29752513 29752528 SCRT1 JASPAR yes 29757327 4799 10280953
chr16 29752517 29752526 SNAI2 JASPAR yes 29757327 4801 10280954
chr16 29752517 29752527 FIGLA JASPAR yes 29757327 4800 10280955
chr16 29752517 29752527 ID4 JASPAR yes 29757327 4800 10280956
chr16 29752517 29752527 TCF3 JASPAR yes 29757327 4800 10280957
chr16 29752517 29752527 TCF4 JASPAR yes 29757327 4800 10280958
chr16 29752519 29752528 ZEB1 JASPAR yes 29757327 4799 10280959
chr16 29752520 29752528 TBX5 JASPAR yes 29757327 4799 10280960
chr16 29752543 29752554 BATF JASPAR yes 29757327 4773 10280961
chr16 29752568 29752579 NFKB1 JASPAR yes 29757327 4748 10280962
chr16 29752569 29752579 NFKB1 JASPAR yes 29757327 4748 10280963
chr16 29752569 29752579 REL JASPAR yes 29757327 4748 10280964
chr16 29752577 29752581 H1TF2 TRANSFAC yes 29757327 4746 10280965
chr16 29752577 29752581 NFE TRANSFAC yes 29757327 4746 10280966
chr16 29752577 29752581 SRF TRANSFAC yes 29757327 4746 10280967
chr16 29752577 29752583 NFYC TRANSFAC yes 29757327 4744 10280968
chr16 29752581 29752596 AR JASPAR yes 29757327 4731 10280969
chr16 29752581 29752598 NR3C1 JASPAR yes 29757327 4729 10280970
chr16 29752581 29752598 NR3C2 JASPAR yes 29757327 4729 10280971
chr16 29752582 29752594 TAL1 JASPAR yes 29757327 4733 10280972
chr16 29752599 29752611 PKNOX2 JASPAR yes 29757327 4716 10280973
chr16 29752600 29752610 TFAP4 JASPAR yes 29757327 4717 10280974
chr16 29752605 29752609 NFE TRANSFAC yes 29757327 4718 10280975
chr16 29752627 29752637 TFEC JASPAR yes 29757327 4690 10280976
chr16 29752653 29752668 FOXP1 JASPAR yes 29757327 4659 10280977
chr16 29752654 29752665 FOXP2 JASPAR yes 29757327 4662 10280978
chr16 29752673 29752691 RARA JASPAR yes 29757327 4636 10280979
chr16 29752707 29752712 SP1 TRANSFAC yes 29757327 4615 10280980
chr16 29752722 29752726 YY1 TRANSFAC yes 29757327 4601 10280981
chr16 29752769 29752782 NR2F1 JASPAR yes 29757327 4545 10280982
chr16 29752772 29752787 HNF4A JASPAR yes 29757327 4540 10280983
chr16 29752773 29752787 NR2F1 JASPAR yes 29757327 4540 10280984
chr16 29752773 29752787 RXRB JASPAR yes 29757327 4540 10280985
chr16 29752773 29752787 RXRG JASPAR yes 29757327 4540 10280986
chr16 29752773 29752788 HNF4G JASPAR yes 29757327 4539 10280987
chr16 29752773 29752788 NR2C2 JASPAR yes 29757327 4539 10280988
chr16 29752781 29752794 ZBTB18 JASPAR yes 29757327 4533 10280989
chr16 29752782 29752792 FIGLA JASPAR yes 29757327 4535 10280990
chr16 29752782 29752792 ID4 JASPAR yes 29757327 4535 10280991
chr16 29752782 29752792 MSC JASPAR yes 29757327 4535 10280992
chr16 29752782 29752792 TCF3 JASPAR yes 29757327 4535 10280993
chr16 29752782 29752792 TCF4 JASPAR yes 29757327 4535 10280994
chr16 29752783 29752792 SNAI2 JASPAR yes 29757327 4535 10280995
chr16 29752784 29752789 USF2 TRANSFAC yes 29757327 4538 10280996
chr16 29752793 29752798 GATA1 TRANSFAC yes 29757327 4529 10280997
chr16 29752827 29752842 HNF4G JASPAR yes 29757327 4485 10280998
chr16 29752828 29752842 NR2F1 JASPAR yes 29757327 4485 10280999
chr16 29752828 29752843 HNF4A JASPAR yes 29757327 4484 10281000
chr16 29752830 29752834 LFA1 TRANSFAC yes 29757327 4493 10281001
chr16 29752838 29752844 MZF1 JASPAR yes 29757327 4483 10281002
chr16 29752853 29752861 MEIS2 JASPAR yes 29757327 4466 10281003
chr16 29752853 29752861 MEIS3 JASPAR yes 29757327 4466 10281004
chr16 29752854 29752858 NFE TRANSFAC yes 29757327 4469 10281005
chr16 29752854 29752861 MEIS1 JASPAR yes 29757327 4466 10281006
chr16 29752871 29752877 GATA1 TRANSFAC yes 29757327 4450 10281007
chr16 29752871 29752879 GATA5 JASPAR yes 29757327 4448 10281008
chr16 29752875 29752880 ETS2 TRANSFAC yes 29757327 4447 10281009
chr16 29752875 29752885 TEAD1 JASPAR yes 29757327 4442 10281010
chr16 29752875 29752885 TEAD4 JASPAR yes 29757327 4442 10281011
chr16 29752876 29752884 TEAD3 JASPAR yes 29757327 4443 10281012
chr16 29752884 29752888 YY1 TRANSFAC yes 29757327 4439 10281013
chr16 29757441 29758574 ZNF274 GTRD no Liver (HepG2) 29757327 114 108191666
chr16 29757547 29758580 ZNF274 GTRD no Liver (HepG2) 29757327 220 108191667
chr16 29757600 29759076 ZNF274 GTRD no Liver (HepG2) 29757327 273 108191668
chr16 29757630 29758619 ZNF274 GTRD no Liver (HepG2) 29757327 303 108191669
chr16 29757632 29758584 TEF1 GTRD no Bone (Osteoblast) 29757327 305 108191670
chr16 29757637 29759051 ZNF274 GTRD no Liver (HepG2) 29757327 310 108191671
chr16 29757663 29758587 ZNF143 GTRD no Epithelial (MCF-7) 29757327 336 108191672
chr16 29757665 29758544 ZNF274 GTRD no Liver (HepG2) 29757327 338 108191673
chr16 29757671 29758447 ZNF274 GTRD no Liver (HepG2) 29757327 344 108191674
chr16 29757688 29759212 ZNF274 GTRD no Liver (HepG2) 29757327 361 108191675
chr16 29757696 29758471 ZNF274 GTRD no Liver (HepG2) 29757327 369 108191676
chr16 29757708 29759058 ZNF274 GTRD no Liver (HepG2) 29757327 381 108191677
chr16 29757739 29758582 ZNF274 GTRD no Liver (HepG2) 29757327 412 108191678
chr16 29757749 29758477 ZNF274 GTRD no Liver (HepG2) 29757327 422 108191679
chr16 29757771 29759009 ZNF274 GTRD no Liver (HepG2) 29757327 444 108191680
chr16 29757772 29758435 ZNF274 GTRD no Liver (HepG2) 29757327 445 108191681
chr16 29757781 29758459 ZNF274 GTRD no Liver (HepG2) 29757327 454 108191682
chr16 29757790 29758492 ZNF274 GTRD no Liver (HepG2) 29757327 463 108191683
chr16 29757793 29758466 ZNF274 GTRD no Liver (HepG2) 29757327 466 108191684
chr16 29757801 29758439 ZNF274 GTRD no Liver (HepG2) 29757327 474 108191685
chr16 29757802 29758456 ZNF274 GTRD no Liver (HepG2) 29757327 475 108191686
chr16 29757831 29758437 ZNF274 GTRD no Bone Marrow (K562) 29757327 504 108191687
chr16 29757835 29758486 ZNF274 GTRD no Bone Marrow (K562) 29757327 508 108191688
chr16 29757838 29758929 ZNF274 GTRD no Liver (HepG2) 29757327 511 108191689
chr16 29757898 29758487 ZNF274 GTRD no Cervix (HeLa-S3) 29757327 571 108191690
chr16 29757915 29758420 ZNF274 GTRD no Liver (HepG2) 29757327 588 108191691
chr16 29757917 29758497 ZNF274 GTRD no Liver (HepG2) 29757327 590 108191692
chr16 29758017 29758463 ZNF274 GTRD no Liver (HepG2) 29757327 690 108191693
chr16 29758065 29758548 ZNF274 GTRD no Liver (HepG2) 29757327 738 108191694
chr16 29758369 29758605 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 29757327 1042 108191695
chr16 29758419 29758430 E2F6 JASPAR yes 29757327 1092 49364120
chr16 29758420 29758425 SP1 TRANSFAC yes 29757327 1093 49364121
chr16 29758421 29758431 SP1 JASPAR yes 29757327 1094 49364122
chr16 29758424 29758445 ZNF263 JASPAR yes 29757327 1097 49364123
chr16 29758428 29758443 TFAP2C JASPAR yes 29757327 1101 49364124
chr16 29758447 29758461 BATF3 JASPAR yes 29757327 1120 49364125
chr16 29758496 29758507 BATF JASPAR yes 29757327 1169 49364126
chr16 29758498 29758509 FOS JASPAR yes 29757327 1171 49364127
chr16 29758498 29758509 FOSL1 JASPAR yes 29757327 1171 49364128
chr16 29758499 29758508 JDP2 JASPAR yes 29757327 1172 49364129
chr16 29758499 29758510 JUNB JASPAR yes 29757327 1172 49364130
chr16 29758499 29758513 JUN JASPAR yes 29757327 1172 49364131
chr16 29758500 29758511 BATF JASPAR yes 29757327 1173 49364132
chr16 29758506 29758512 ZNF354C JASPAR yes 29757327 1179 49364133
chr16 29758508 29759068 ZNF274 GTRD no Liver (HepG2) 29757327 1181 108191696
chr16 29758542 29758547 H4TF1 TRANSFAC yes 29757327 1215 49364134
chr16 29758557 29758961 ZNF274 GTRD no Liver (HepG2) 29757327 1230 108191697
SNPs associated with C16orf54[ENSG00000185905.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 29308026 rs144486888 C T 445758 Esophagus 0.10746 4403969
chr16 29748325 rs235663 A G 5459 Esophagus 0.272984 4405767
chr16 29171023 rs57551544 A G 582761 Esophagus 0.146289 4402142
chr16 29319539 rs257881 A T 434245 Spleen 0.441856 4404152
chr16 29180407 rs252355 T G 573377 Ovary 0.381996 4402229
chr16 29867476 rs8059271 C G 110149 Uterus 0.148383 4406552
chr16 29972399 rs143948379 G A 215072 Thyroid 0.110918 4406869
chr16 28891232 rs11350407 C CG 862552 Liver 0.438345 4400980
chr16 29198051 rs112030951 G C 555733 Adrenal 0.556527 4402499
Details of C16orf54[ENSG00000185905.3]
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Genomic Location chr16:29753784-29757327[-]
TSS 29757327
Gene Name C16orf54
Ensembl ID ENSG00000185905.3
ENTREZID 283897
Uniprot
Q6UWD8
Protein Name
Transmembrane protein C16orf54
Expression levels of C16orf54[ENSG00000185905.3]
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