EnhancerDB
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Enhancers that regulate RNF220[ENSG00000187147.13]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr1 44767345 44773935 enh49725 44870866 96931
Peripheral Blood (MM.1S) Large Intestine
chr1 44774145 44778295 enh49726 44870866 92571
Large Intestine
chr1 44778905 44784295 enh309 44870866 86571
Muscle (A673) Blood (Karpas-422)
chr1 44789685 44797415 enh11821 44870866 73451
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Lung (PC-9) Pancreas Uterus Epithelial (MCF-7)
chr1 44809145 44816115 enh61833 44870866 54751
Esophagus Muscle (A673) Prostate (PC-3)
chr1 44841980 44846130 enh66910 44870866 24736
Neural Stem Cells (H9)
chr1 44853903 44858413 enh26663 44870866 12453
Astrocyte Bone (Osteoblast) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
chr1 44885412 44896815 enh310 44870866 14546
Esophagus Lung Stomach Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr1 44887961 44887973 vista1440 44870866 17095
VISTA
chr1 44897170 44897489 vista1441 44870866 26304
VISTA
chr1 44900180 44904987 enh116126 44870866 29314
Pancreas (Panc1)
chr1 44924245 44928395 enh94012 44870866 53379
Spleen
chr1 44936825 44941035 enh98449 44870866 65959
Uterus
chr1 44941668 44941887 vista1442 44870866 70802
VISTA
chr1 44947857 44957455 enh26664 44870866 76991
Cervix (HeLa-S3) Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Uterus Muscle (Myoblast) Breast Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
chr1 44950888 44951090 vista1443 44870866 80022
VISTA
chr1 44951424 44951733 vista1444 44870866 80558
VISTA
chr1 44960407 44973606 enh42944 44870866 89541
Thyroid Muscle (Myotube) Embryonic Stem Cell Line (H1-hESC) Heart
chr1 44962677 44962982 vista1445 44870866 91811
VISTA
Transcript facotrs that regulate RNF220[ENSG00000187147.13]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with RNF220[ENSG00000187147.13], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr1 45571417 rs116644705 G A 454021 Esophagus 0.261102 282171
chr1 45016499 rs147862993 T C 0 Esophagus 0.0133114 279647
chr1 44441533 rs2286243 A G 429333 Esophagus 0.393863 276071
chr1 45167143 rs2180765 G A 49747 Ovary 0.409464 280594
chr1 44896822 rs72893857 G A 0 Uterus 0.28701 278705
chr1 44623428 rs17414232 C T 247438 Liver 0.333282 277410
chr1 44948568 rs57826516 T C,G 0 Lung 0.123364 278935
chr1 45000932 rs115297578 C A 0 Adrenal 0.105623 279483
Details of RNF220[ENSG00000187147.13]
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Genomic Location chr1:44870866-45117396[+]
TSS 44870866
Gene Name RNF220
Ensembl ID ENSG00000187147.13
ENTREZID 55182
Uniprot
Q5VTB9
Protein Name
E3 ubiquitin-protein ligase RNF220
RNF220 protein
Expression levels of RNF220[ENSG00000187147.13]
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