EnhancerDB
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Enhancers that regulate TCF4[ENSG00000196628.9]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr18 53238771 53242921 enh69477 53332018 89097
Neural Stem Cells (H9)
chr18 53243105 53255715 enh4860 53332018 76303
Brain (SK-N-SH) Muscle (A673) Uterus Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Neural Stem Cells (H9)
chr18 53298349 53302499 enh62693 53332018 29519
Esophagus
chr18 53315874 53320806 enh44579 53332018 11212
Muscle (Myoblast) Muscle (Myotube)
chr18 53332836 53333181 vista27523 53332018 818
VISTA
chr18 53337945 53342295 enh65148 53332018 5927
Uterus Heart
chr18 53355940 53355975 vista27524 53332018 23922
VISTA
chr18 53361338 53361366 vista27525 53332018 29320
VISTA
chr18 53364985 53369135 enh76013 53332018 32967
Muscle (A673)
chr18 53372030 53376512 enh94974 53332018 40012
Muscle (Myoblast) Bone (Osteoblast)
chr18 53396905 53402035 enh32711 53332018 64887
Bone Marrow (K562) Astrocyte Bone (Osteoblast) Muscle (Myoblast) Uterus
chr18 53413605 53417779 enh69478 53332018 81587
Bone Marrow (K562) Neural Stem Cells (H9)
chr18 53418705 53423415 enh58825 53332018 86687
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9)
chr18 53426705 53437726 enh32712 53332018 94687
Prostate (PC-3) Brain (SK-N-SH) Astrocyte Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9)
Transcript facotrs that regulate TCF4[ENSG00000196628.9]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr18 53332849 53332862 POU2F2 JASPAR yes 53332018 831 42711595
chr18 53332849 53332863 POU1F1 JASPAR yes 53332018 831 42711596
chr18 53332850 53332862 POU3F1 JASPAR yes 53332018 832 42711597
chr18 53332850 53332862 POU3F2 JASPAR yes 53332018 832 42711598
chr18 53332850 53332863 POU3F3 JASPAR yes 53332018 832 42711599
chr18 53332851 53332855 YY1 TRANSFAC yes 53332018 833 42711600
chr18 53332851 53332863 POU2F1 JASPAR yes 53332018 833 42711601
chr18 53332852 53332859 POU2F1 TRANSFAC yes 53332018 834 42711602
chr18 53332852 53332859 POU2F2C TRANSFAC yes 53332018 834 42711603
chr18 53332852 53332859 POU2F2 TRANSFAC yes 53332018 834 42711604
chr18 53332852 53332860 POU2F1 TRANSFAC yes 53332018 834 42711605
chr18 53332852 53332861 POU3F4 JASPAR yes 53332018 834 42711606
chr18 53332852 53332861 POU5F1B JASPAR yes 53332018 834 42711607
chr18 53332865 53332869 TEAD2 TRANSFAC yes 53332018 847 42711608
chr18 53332867 53332870 MYB TRANSFAC yes 53332018 849 42711609
chr18 53332870 53332876 LEF1 TRANSFAC yes 53332018 852 42711610
chr18 53332870 53332876 SOX10 JASPAR yes 53332018 852 42711611
chr18 53332875 53332878 MYB TRANSFAC yes 53332018 857 42711612
chr18 53332886 53332904 NFYA JASPAR yes 53332018 868 42711613
chr18 53332889 53332905 NFYA JASPAR yes 53332018 871 42711614
chr18 53332891 53332901 ALX3 JASPAR yes 53332018 873 42711615
chr18 53332891 53332901 ESX1 JASPAR yes 53332018 873 42711616
chr18 53332891 53332901 GBX1 JASPAR yes 53332018 873 42711617
chr18 53332891 53332901 GBX2 JASPAR yes 53332018 873 42711618
chr18 53332891 53332901 GSX1 JASPAR yes 53332018 873 42711619
chr18 53332891 53332901 GSX2 JASPAR yes 53332018 873 42711620
chr18 53332891 53332901 HESX1 JASPAR yes 53332018 873 42711621
chr18 53332891 53332901 HOXB3 JASPAR yes 53332018 873 42711622
chr18 53332891 53332901 LBX2 JASPAR yes 53332018 873 42711623
chr18 53332891 53332901 LHX2 JASPAR yes 53332018 873 42711624
chr18 53332891 53332901 MIXL1 JASPAR yes 53332018 873 42711625
chr18 53332891 53332901 RAX JASPAR yes 53332018 873 42711626
chr18 53332892 53332900 BARX1 JASPAR yes 53332018 874 42711627
chr18 53332892 53332900 BSX JASPAR yes 53332018 874 42711628
chr18 53332892 53332900 EN1 JASPAR yes 53332018 874 42711629
chr18 53332892 53332900 ISX JASPAR yes 53332018 874 42711630
chr18 53332892 53332900 LHX9 JASPAR yes 53332018 874 42711631
chr18 53332892 53332900 MSX1 JASPAR yes 53332018 874 42711632
chr18 53332892 53332900 MSX2 JASPAR yes 53332018 874 42711633
chr18 53332892 53332900 PRRX1 JASPAR yes 53332018 874 42711634
chr18 53332892 53332900 RAX2 JASPAR yes 53332018 874 42711635
chr18 53332892 53332900 SHOX JASPAR yes 53332018 874 42711636
chr18 53332892 53332901 VENTX JASPAR yes 53332018 874 42711637
chr18 53332892 53332907 NFYB JASPAR yes 53332018 874 42711638
chr18 53332898 53332902 ESR1 TRANSFAC yes 53332018 880 42711639
chr18 53332906 53332921 NFYB JASPAR yes 53332018 888 42711640
chr18 53332908 53332924 NFYA JASPAR yes 53332018 890 42711641
chr18 53332909 53332927 NFYA JASPAR yes 53332018 891 42711642
chr18 53332910 53332922 PBX1 JASPAR yes 53332018 892 42711643
chr18 53332913 53332917 H1TF2 TRANSFAC yes 53332018 895 42711644
chr18 53332913 53332917 NFE TRANSFAC yes 53332018 895 42711645
chr18 53332913 53332917 SRF TRANSFAC yes 53332018 895 42711646
chr18 53332937 53332940 MYB TRANSFAC yes 53332018 919 42711647
chr18 53332940 53332946 LEF1 TRANSFAC yes 53332018 922 42711648
chr18 53332940 53332946 SOX10 JASPAR yes 53332018 922 42711649
chr18 53332945 53332948 MYB TRANSFAC yes 53332018 927 42711650
chr18 53332956 53332973 RARA JASPAR yes 53332018 938 42711651
chr18 53332956 53332974 NFYA JASPAR yes 53332018 938 42711652
chr18 53332959 53332975 NFYA JASPAR yes 53332018 941 42711653
chr18 53332962 53332977 NFYB JASPAR yes 53332018 944 42711654
chr18 53332964 53332969 NFY TRANSFAC yes 53332018 946 42711655
chr18 53332966 53332980 TLX1 JASPAR yes 53332018 948 42711656
chr18 53332971 53332977 SP1 TRANSFAC yes 53332018 953 42711657
chr18 53332971 53332981 SP1 JASPAR yes 53332018 953 42711658
chr18 53332971 53332981 ZNF740 JASPAR yes 53332018 953 42711659
chr18 53333010 53333023 POU2F2 JASPAR yes 53332018 992 42711660
chr18 53333010 53333024 POU1F1 JASPAR yes 53332018 992 42711661
chr18 53333011 53333022 FOXB1 JASPAR yes 53332018 993 42711662
chr18 53333011 53333023 POU3F1 JASPAR yes 53332018 993 42711663
chr18 53333011 53333023 POU3F2 JASPAR yes 53332018 993 42711664
chr18 53333012 53333016 YY1 TRANSFAC yes 53332018 994 42711665
chr18 53333012 53333024 POU2F1 JASPAR yes 53332018 994 42711666
chr18 53333013 53333022 POU3F4 JASPAR yes 53332018 995 42711667
chr18 53333013 53333022 POU5F1B JASPAR yes 53332018 995 42711668
chr18 53333014 53333022 FOXL1 JASPAR yes 53332018 996 42711669
chr18 53333029 53333041 FOXI1 JASPAR yes 53332018 1011 42711670
chr18 53333032 53333047 NFYB JASPAR yes 53332018 1014 42711671
chr18 53333034 53333050 NFYA JASPAR yes 53332018 1016 42711672
chr18 53333035 53333053 NFYA JASPAR yes 53332018 1017 42711673
chr18 53333036 53333039 MYB TRANSFAC yes 53332018 1018 42711674
chr18 53333039 53333043 H1TF2 TRANSFAC yes 53332018 1021 42711675
chr18 53333039 53333043 NFE TRANSFAC yes 53332018 1021 42711676
chr18 53333039 53333043 SRF TRANSFAC yes 53332018 1021 42711677
chr18 53333045 53333060 HSF1 JASPAR yes 53332018 1027 42711678
chr18 53333061 53333065 YY1 TRANSFAC yes 53332018 1043 42711679
chr18 53333068 53333083 HSF1 JASPAR yes 53332018 1050 42711680
chr18 53333069 53333082 HSF1 JASPAR yes 53332018 1051 42711681
chr18 53333073 53333088 HSF1 JASPAR yes 53332018 1055 42711682
chr18 53333074 53333087 HSF1 JASPAR yes 53332018 1056 42711683
chr18 53333074 53333087 HSF2 JASPAR yes 53332018 1056 42711684
chr18 53333074 53333087 HSF4 JASPAR yes 53332018 1056 42711685
chr18 53333084 53333087 MYB TRANSFAC yes 53332018 1066 42711686
chr18 53333114 53333133 CTCF JASPAR yes 53332018 1096 42711687
chr18 53333117 53333125 TBX15 JASPAR yes 53332018 1099 42711688
chr18 53333124 53333136 TEAD1 JASPAR yes 53332018 1106 42711689
chr18 53333126 53333136 TEAD1 JASPAR yes 53332018 1108 42711690
chr18 53333126 53333136 TEAD4 JASPAR yes 53332018 1108 42711691
chr18 53333127 53333135 TEAD3 JASPAR yes 53332018 1109 42711692
chr18 53333131 53333152 IRF1 JASPAR yes 53332018 1113 42711693
chr18 53333133 53333148 STAT2 JASPAR yes 53332018 1115 42711694
chr18 53333135 53333147 IRF1 JASPAR yes 53332018 1117 42711695
chr18 53333135 53333149 IRF7 JASPAR yes 53332018 1117 42711696
chr18 53333135 53333150 IRF9 JASPAR yes 53332018 1117 42711697
chr18 53333137 53333143 TCF4 TRANSFAC yes 53332018 1119 42711698
chr18 53333137 53333152 FOXP1 JASPAR yes 53332018 1119 42711699
chr18 53333138 53333147 SRY JASPAR yes 53332018 1120 42711700
chr18 53333138 53333149 FOXP2 JASPAR yes 53332018 1120 42711701
chr18 53333140 53333148 FOXO3 JASPAR yes 53332018 1122 42711702
chr18 53333155 53333176 IRF1 JASPAR yes 53332018 1137 42711703
chr18 53333156 53333177 IRF1 JASPAR yes 53332018 1138 42711704
chr18 53333157 53333178 IRF1 JASPAR yes 53332018 1139 42711705
chr18 53333158 53333179 IRF1 JASPAR yes 53332018 1140 42711706
chr18 53333159 53333174 FOXP1 JASPAR yes 53332018 1141 42711707
chr18 53333159 53333180 IRF1 JASPAR yes 53332018 1141 42711708
chr18 53333160 53333175 FOXP1 JASPAR yes 53332018 1142 42711709
chr18 53333161 53333176 FOXP1 JASPAR yes 53332018 1143 42711710
chr18 53333162 53333177 FOXP1 JASPAR yes 53332018 1144 42711711
chr18 53333163 53333178 FOXP1 JASPAR yes 53332018 1145 42711712
chr18 53333164 53333179 FOXP1 JASPAR yes 53332018 1146 42711713
chr18 53333165 53333180 FOXP1 JASPAR yes 53332018 1147 42711714
chr18 53333166 53333181 FOXP1 JASPAR yes 53332018 1148 42711715
SNPs associated with TCF4[ENSG00000196628.9], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr18 53050523 rs1788019 G A 0 Esophagus 0.00323597 5268229
chr18 52657793 rs182147179 C T 231769 Esophagus 0.214021 5265848
chr18 53889197 rs9953268 C T 557179 Heart 0.27525 5271886
chr18 54210334 rs139719734 C T 878316 Breast 0.238974 5273636
chr18 53834328 rs56108140 T G 502310 Ovary 0.349777 5271634
chr18 52909890 rs75373793 G T 0 Uterus 0.501584 5267211
chr18 53502108 rs148967995 A G 170090 Liver 0.803885 5270281
chr18 54172642 rs1943086 C T 840624 Lung 0.157123 5273353
chr18 53011551 rs72926906 C A 0 Stomach 0.40523 5267902
chr18 53912005 rs12455576 C T 579987 Adrenal 0.233376 5272042
Details of TCF4[ENSG00000196628.9]
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Genomic Location chr18:52889562-53332018[-]
TSS 53332018
Gene Name TCF4
Ensembl ID ENSG00000196628.9
ENTREZID 6925
Uniprot
H3BPJ7
A0A024R2C0
A0A1B0GWD5
A0A1B0GVR6
H3BTP3
E9PH57
P15884
B3KVA4
Protein Name
isoform C
isoform CRA_b
isoform D
isoform E
isoform L
isoform M
isoform R
Transcription factor 4
Transcription factor 4
Transcription factor 4
Transcription factor 4
Transcription factor 4
Transcription factor 4
Transcription factor 4
Transcription factor 4
Transcription factor 7-like 2
Expression levels of TCF4[ENSG00000196628.9]
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