EnhancerDB

Chrom.	Start	End	Enhancer ID	TSS of gene	Distance between enhancer and TSS	Tissues that enhancer appears
chr6	33308645	33317035	enh49078	33387847	70812	Bone Marrow (K562) Prostate (PC-3) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Lung (PC-9) Uterus Thymus Epithelial (MCF-7)
chr6	33311865	33311969	vista51637	33387847	75878	VISTA
chr6	33312244	33312406	vista51638	33387847	75441	VISTA
chr6	33321745	33334495	enh23157	33387847	53352	Bone Marrow (K562) Esophagus Stomach Placenta Thyroid Lung (PC-9) Epithelial (MCF-7)
chr6	33338553	33346195	enh59610	33387847	41652	Bone Marrow (K562) Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Liver Thyroid Uterus Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
chr6	33361031	33365169	enh86617	33387847	22678	Colon (HCT116)
chr6	33378365	33382515	enh9059	33387847	5332	Blood (Karpas-422)
chr6	33386765	33387072	vista51639	33387847	775	VISTA
chr6	33390985	33399275	enh9060	33387847	3138	Bone Marrow (K562) Skin (Keratinocyte) Blood (T-cell) Bone (Osteoblast) Blood (Karpas-422) Thymus
chr6	33392796	33393285	vista51640	33387847	4949	VISTA
chr6	33396313	33396709	vista51641	33387847	8466	VISTA
chr6	33401049	33401362	vista51642	33387847	13202	VISTA
chr6	33454285	33460275	enh55713	33387847	66438	Large Intestine Epithelial (MCF-7)
chr6	33471785	33479075	enh66189	33387847	83938	Prostate (PC-3) Liver (HepG2) Blood (GM12878) Uterus Heart

Transcript facotrs that regulate SYNGAP1[ENSG00000197283.8]

Chrom.	Start	End	TF name	Source	Predicted site?	Tissue	TSS of gene	Distance between TFBS and gene	id
chr6	33384114	33386913	POLR2A	UCSC Txn Factor	no	Conserved	33387847	934	108539734
chr6	33386785	33386799	RORA	JASPAR	yes		33387847	1048	70349148
chr6	33386795	33386798	MYB	TRANSFAC	yes		33387847	1049	70349149
chr6	33386797	33386812	TFAP2A	JASPAR	yes		33387847	1035	70349150
chr6	33386799	33386814	TFAP2A	JASPAR	yes		33387847	1033	70349151
chr6	33386799	33386814	TFAP2C	JASPAR	yes		33387847	1033	70349152
chr6	33386800	33386811	EBF1	JASPAR	yes		33387847	1036	70349153
chr6	33386801	33386810	TFAP2A	JASPAR	yes		33387847	1037	70349154
chr6	33386805	33386810	SP1	TRANSFAC	yes		33387847	1037	70349155
chr6	33386812	33386827	AR	JASPAR	yes		33387847	1020	70349156
chr6	33386814	33386825	FLI1	JASPAR	yes		33387847	1022	70349157
chr6	33386815	33386825	ERF	JASPAR	yes		33387847	1022	70349158
chr6	33386815	33386825	ERG	JASPAR	yes		33387847	1022	70349159
chr6	33386815	33386825	ETS1	JASPAR	yes		33387847	1022	70349160
chr6	33386823	33386841	SRF	JASPAR	yes		33387847	1006	70349161
chr6	33386826	33386838	SRF	JASPAR	yes		33387847	1009	70349162
chr6	33386840	33386855	NFYB	JASPAR	yes		33387847	992	70349163
chr6	33386842	33386858	NFYA	JASPAR	yes		33387847	989	70349164
chr6	33386843	33386848	SP1	TRANSFAC	yes		33387847	999	70349165
chr6	33386843	33386861	NFYA	JASPAR	yes		33387847	986	70349166
chr6	33386847	33386851	H1TF2	TRANSFAC	yes		33387847	996	70349167
chr6	33386847	33386851	NFE	TRANSFAC	yes		33387847	996	70349168
chr6	33386847	33386851	SRF	TRANSFAC	yes		33387847	996	70349169
chr6	33386851	33387070	RUNX3	UCSC Txn Factor	no	Conserved	33387847	777	108539735
chr6	33386853	33386874	ZNF263	JASPAR	yes		33387847	973	70349170
chr6	33386854	33386875	ZNF263	JASPAR	yes		33387847	972	70349171
chr6	33386863	33386871	TBX15	JASPAR	yes		33387847	976	70349172
chr6	33386863	33386874	E2F6	JASPAR	yes		33387847	973	70349173
chr6	33386864	33386869	SP1	TRANSFAC	yes		33387847	978	70349174
chr6	33386865	33386875	SP1	JASPAR	yes		33387847	972	70349175
chr6	33386868	33386889	ZNF263	JASPAR	yes		33387847	958	70349176
chr6	33386885	33386895	MSC	JASPAR	yes		33387847	952	70349177
chr6	33386885	33387050	JUND	UCSC Txn Factor	no	Conserved	33387847	797	108539736
chr6	33386899	33386905	NFE2	TRANSFAC	yes		33387847	942	70349178
chr6	33386909	33386913	H1TF2	TRANSFAC	yes		33387847	934	70349179
chr6	33386909	33386913	NFE	TRANSFAC	yes		33387847	934	70349180
chr6	33386909	33386913	SRF	TRANSFAC	yes		33387847	934	70349181
chr6	33386913	33386917	YY1	TRANSFAC	yes		33387847	930	70349182
chr6	33386915	33386925	MZF1	JASPAR	yes		33387847	922	70349183
chr6	33386918	33386924	SP1	TRANSFAC	yes		33387847	923	70349184
chr6	33386928	33386943	NR2C2	JASPAR	yes		33387847	904	70349185
chr6	33386929	33386943	NR2F1	JASPAR	yes		33387847	904	70349186
chr6	33386929	33386943	RXRB	JASPAR	yes		33387847	904	70349187
chr6	33386929	33386943	RXRG	JASPAR	yes		33387847	904	70349188
chr6	33386931	33386944	JUN	JASPAR	yes		33387847	903	70349189
chr6	33386934	33386947	NR2F1	JASPAR	yes		33387847	900	70349190
chr6	33386935	33386943	CREB1	JASPAR	yes		33387847	904	70349191
chr6	33386936	33386952	NFYA	JASPAR	yes		33387847	895	70349192
chr6	33386938	33386942	ESR1	TRANSFAC	yes		33387847	905	70349193
chr6	33386939	33386954	NFYB	JASPAR	yes		33387847	893	70349194
chr6	33386942	33386962	RREB1	JASPAR	yes		33387847	885	70349195
chr6	33386953	33386958	SP1	TRANSFAC	yes		33387847	889	70349196
chr6	33386955	33386960	TFAP2A	TRANSFAC	yes		33387847	887	70349197
chr6	33386955	33386961	MZF1	JASPAR	yes		33387847	886	70349198
chr6	33386966	33386976	RELA	JASPAR	yes		33387847	871	70349199
chr6	33386966	33386976	REL	JASPAR	yes		33387847	871	70349200
chr6	33386966	33386977	NFKB1	JASPAR	yes		33387847	870	70349201
chr6	33386967	33386977	NFKB1	JASPAR	yes		33387847	870	70349202
chr6	33386976	33386988	CREB1	JASPAR	yes		33387847	859	70349203
chr6	33386978	33386992	ATF7	JASPAR	yes		33387847	855	70349204
chr6	33386978	33386992	BATF3	JASPAR	yes		33387847	855	70349205
chr6	33386979	33386991	JDP2	JASPAR	yes		33387847	856	70349206
chr6	33386981	33386986	ATF1	TRANSFAC	yes		33387847	861	70349207
chr6	33386981	33386989	CREB1	JASPAR	yes		33387847	858	70349208
chr6	33386983	33386988	ATF1	TRANSFAC	yes		33387847	859	70349209
chr6	33387012	33387033	ZNF263	JASPAR	yes		33387847	814	70349210
chr6	33387013	33387017	LFA1	TRANSFAC	yes		33387847	830	70349211
chr6	33387016	33387037	ZNF263	JASPAR	yes		33387847	810	70349212
chr6	33387017	33387038	ZNF263	JASPAR	yes		33387847	809	70349213
chr6	33387018	33387023	ETS2	TRANSFAC	yes		33387847	824	70349214
chr6	33387023	33387033	ZNF740	JASPAR	yes		33387847	814	70349215
chr6	33387024	33387029	TFAP2A	TRANSFAC	yes		33387847	818	70349216
chr6	33387024	33387030	MZF1	JASPAR	yes		33387847	817	70349217
chr6	33387024	33387034	SP1	JASPAR	yes		33387847	813	70349218
chr6	33387025	33387034	SP1	TRANSFAC	yes		33387847	813	70349219
chr6	33387026	33387032	MAZ	TRANSFAC	yes		33387847	815	70349220
chr6	33387030	33387041	NFKB1	JASPAR	yes		33387847	806	70349221
chr6	33387031	33387042	NFKB1	JASPAR	yes		33387847	805	70349222
chr6	33387050	33387054	NFE	TRANSFAC	yes		33387847	793	70349223
chr6	33392764	33394164	POLR2A	UCSC Txn Factor	no	Conserved	33387847	4917	108539737
chr6	33392803	33392822	REST	JASPAR	yes		33387847	4956	70349224
chr6	33392803	33392822	REST	JASPAR	yes		33387847	4956	101148860
chr6	33392830	33392850	RREB1	JASPAR	yes		33387847	4983	70349225
chr6	33392830	33392850	RREB1	JASPAR	yes		33387847	4983	101148861
chr6	33392845	33392866	ZNF263	JASPAR	yes		33387847	4998	70349226
chr6	33392845	33392866	ZNF263	JASPAR	yes		33387847	4998	101148862

Chrom.	Position	dbSNP ID	Reference Allele	Alternative Allele	Distance between TSS and SNP	Tissue	q Value	id
chr6	33214304	rs146186643	G	A	173543	Esophagus	0.123205	8972333
chr6	33266475	rs561105011	G	A,T	121372	Spleen	0.292818	8972628
chr6	33316450	rs187208364	C	A,G	71397	Thyroid	0.142972	8972854
chr6	33094968	rs9277754	T	C	292879	Stomach	0.398032	8971966

Genomic Location	chr6:33387847-33421466[+]
TSS	33387847
Gene Name	SYNGAP1
Ensembl ID	ENSG00000197283.8
ENTREZID	8831
Uniprot
Uniprot	Q96PV0
Protein Name
	Ras/Rap GTPase-activating protein SynGAP
	SYNGAP1

EnhancerDB

Enhancers that regulate SYNGAP1[ENSG00000197283.8]

Transcript facotrs that regulate SYNGAP1[ENSG00000197283.8]

SNPs associated with SYNGAP1[ENSG00000197283.8], confirmed by eQTL

Details of SYNGAP1[ENSG00000197283.8]

Expression levels of SYNGAP1[ENSG00000197283.8]