EnhancerDB
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Enhancers that regulate FAM109A[ENSG00000198324.10]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 111746925 111755075 enh108548 111806925 51850
Lung (PC-9)
chr12 111752741 111753113 vista14898 111806925 53812
VISTA
chr12 111761134 111771367 enh86145 111806925 35558
Pancreas Colon (HCT116)
chr12 111825445 111838655 enh14992 111806925 18520
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Uterus
chr12 111836487 111836654 vista14899 111806925 29562
VISTA
chr12 111838834 111855141 enh2601 111806925 31909
Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Lung (PC-9) Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Uterus Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr12 111842634 111842962 vista14900 111806925 35709
VISTA
chr12 111847309 111847501 vista14901 111806925 40384
VISTA
chr12 111847615 111848064 vista14902 111806925 40690
VISTA
chr12 111858009 111880135 enh2602 111806925 51084
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 111866764 111867021 vista14903 111806925 59839
VISTA
chr12 111867956 111868269 vista14904 111806925 61031
VISTA
chr12 111868510 111869152 vista14905 111806925 61585
VISTA
chr12 111870317 111870607 vista14906 111806925 63392
VISTA
chr12 111875686 111876044 vista14907 111806925 68761
VISTA
chr12 111880805 111892430 enh75177 111806925 73880
Muscle (A673)
chr12 111881338 111881509 vista14908 111806925 74413
VISTA
chr12 111883923 111883990 vista14909 111806925 76998
VISTA
chr12 111902965 111907635 enh29984 111806925 96040
Astrocyte Liver (HepG2)
chr12 111904763 111905142 vista14910 111806925 97838
VISTA
Transcript facotrs that regulate FAM109A[ENSG00000198324.10]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with FAM109A[ENSG00000198324.10], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 112022149 rs56945768 A G 215224 Esophagus 0.0945331 2903026
chr12 111328434 rs367781737 CAG C 470021 Heart 0.345684 2899969
chr12 111639098 rs3809293 G C 159357 Heart 0.23478 2901603
chr12 111883779 rs2239194 C T 76854 Pancreas 0.384011 2902505
chr12 112197562 rs34229224 G A 390637 Spleen 0.274653 2903446
chr12 112554962 rs4534647 C T 748037 Ovary 0.411485 2904567
chr12 111828663 rs11065888 G C 21738 Lung 0.0177172 2902051
chr12 110855753 rs73206888 G C 942702 Stomach 0.159553 2897797
chr12 111845391 rs79061463 G A 38466 Adrenal 0.267799 2902200
Details of FAM109A[ENSG00000198324.10]
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Genomic Location chr12:111798455-111806925[-]
TSS 111806925
Gene Name FAM109A
Ensembl ID ENSG00000198324.10
ENTREZID 144717
Uniprot
Q8N4B1
Protein Name
isoform CRA_d
member A
Family with sequence similarity 109
Sesquipedalian-1
Expression levels of FAM109A[ENSG00000198324.10]
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