EnhancerDB
  1. Home
  2. Gene
  3. GPN1[ENSG00000198522.9]
Enhancers that regulate GPN1[ENSG00000198522.9]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr2 27747565 27752415 enh81600 27851114 98699
Prostate (PC-3) Lung (PC-9) Colon (HCT116)
chr2 27771085 27775235 enh81601 27851114 75879
Prostate (PC-3)
chr2 27877424 27877712 vista30782 27851114 26310
VISTA
chr2 27878874 27879165 vista30783 27851114 27760
VISTA
chr2 27904469 27908619 enh62764 27851114 53355
Esophagus
chr2 27922526 27936875 enh18375 27851114 71412
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr2 27939397 27939784 vista30784 27851114 88283
VISTA
chr2 27939854 27940151 vista30785 27851114 88740
VISTA
chr2 27941049 27963575 enh18376 27851114 89935
Astrocyte Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr2 27942982 27943239 vista30786 27851114 91868
VISTA
Transcript facotrs that regulate GPN1[ENSG00000198522.9]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
SNPs associated with GPN1[ENSG00000198522.9], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr2 27386087 rs2580757 T C 465027 Esophagus 0.234464 5602479
chr2 27410609 rs62128745 G A 440505 Esophagus 0.309068 5602734
chr2 28647703 rs67385572 A G 773328 Breast 0.347965 5608774
chr2 27177428 rs61007968 G C 673686 Spleen 0.188074 5601656
chr2 28374882 rs55634306 G T 500507 Uterus 0.215876 5606351
chr2 28614304 rs11680860 G A 739929 Thyroid 0.234875 5608429
chr2 27971195 rs10196039 C T 96820 Adrenal 0.08523 5604130
Details of GPN1[ENSG00000198522.9]
Back to top
Genomic Location chr2:27851114-27874375[+]
TSS 27851114
Gene Name GPN1
Ensembl ID ENSG00000198522.9
ENTREZID 11321
Uniprot
Q9HCN4
Protein Name
GPN-loop GTPase 1
Expression levels of GPN1[ENSG00000198522.9]
Back to top