EnhancerDB
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Enhancers that regulate LRRC10[ENSG00000198812.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 69899945 69911375 enh2429 70004942 93567
Brain (SK-N-SH) Ovary Astrocyte Lung Muscle (A673) Blood (Karpas-422) Uterus Heart
chr12 69919560 69924028 enh14823 70004942 80914
Skin (Keratinocyte) Prostate (PC-3) Prostate (RWPE1) Astrocyte Stomach Placenta Lung (PC-9) Uterus Epithelial (MCF-7)
chr12 69925705 69931575 enh29690 70004942 73367
Kidney Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
chr12 69932680 69937040 enh29691 70004942 67902
Muscle (Myoblast) Astrocyte Bone (Osteoblast)
chr12 69945125 69951555 enh14824 70004942 53387
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Liver Astrocyte Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
chr12 69958561 69962719 enh86121 70004942 42223
Colon (HCT116)
chr12 70007126 70007281 vista13967 70004942 2184
VISTA
chr12 70010849 70027715 enh64612 70004942 5907
Bone Marrow (K562) Brain (SK-N-MC) Pancreas Neural Stem Cells (H9) Heart
chr12 70013289 70013310 vista13968 70004942 8347
VISTA
chr12 70040306 70044590 enh29692 70004942 35364
Astrocyte Bone (Osteoblast) Prostate (RWPE1)
chr12 70047445 70058755 enh14825 70004942 42503
Bone Marrow (K562) Placenta Brain (SK-N-MC) Prostate (RWPE1)
chr12 70078605 70082755 enh80243 70004942 73663
Prostate (PC-3)
chr12 70081797 70082155 vista13969 70004942 76855
VISTA
Transcript facotrs that regulate LRRC10[ENSG00000198812.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 70007136 70007154 NFYA JASPAR yes 70004942 2194 82431398
chr12 70007149 70007160 NFE2L2 JASPAR yes 70004942 2207 82431399
chr12 70007183 70007187 ESR1 TRANSFAC yes 70004942 2241 82431400
chr12 70007203 70007216 ELF1 JASPAR yes 70004942 2261 82431401
chr12 70007210 70007225 HNF4G JASPAR yes 70004942 2268 82431402
chr12 70007224 70007229 MYB TRANSFAC yes 70004942 2282 82431403
chr12 70007257 70007276 PAX5 JASPAR yes 70004942 2315 82431404
chr12 70007263 70007269 TCF4 TRANSFAC yes 70004942 2321 82431405
chr12 70007267 70007279 FOXI1 JASPAR yes 70004942 2325 82431406
chr12 70007270 70007274 YY1 TRANSFAC yes 70004942 2328 82431407
SNPs associated with LRRC10[ENSG00000198812.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 69958605 rs11177719 G A 43746 Heart 0.0543964 2718157
chr12 70042867 rs7299233 C T 37925 Heart 0.0297995 2718511
Details of LRRC10[ENSG00000198812.3]
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Genomic Location chr12:70002351-70004942[-]
TSS 70004942
Gene Name LRRC10
Ensembl ID ENSG00000198812.3
ENTREZID 376132
Uniprot
Q5BKY1
Protein Name
LRRC10 protein
Leucine-rich repeat-containing protein 10
Expression levels of LRRC10[ENSG00000198812.3]
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