EnhancerDB
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Enhancers that regulate CASC10[ENSG00000204682.5]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr10 21682025 21700835 enh13042 21786191 85356
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Blood (T-cell) Heart
chr10 21703520 21703700 vista6729 21786191 82491
VISTA
chr10 21704242 21724835 enh13043 21786191 61356
Prostate (PC-3) Brain (SK-N-MC) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
chr10 21716825 21717072 vista6730 21786191 69119
VISTA
chr10 21725525 21740455 enh13044 21786191 45736
Muscle (A673) Placenta Peripheral Blood (MM.1S)
chr10 21749705 21756195 enh13045 21786191 29996
Placenta
chr10 21775665 21779815 enh101186 21786191 6376
Thyroid
chr10 21789044 21789221 vista6731 21786191 2853
VISTA
chr10 21790184 21790342 vista6732 21786191 3993
VISTA
chr10 21792582 21798473 enh50345 21786191 6391
Liver (HepG2) Large Intestine Embryonic Stem Cell Line (H1-hESC)
chr10 21795346 21795467 vista6733 21786191 9155
VISTA
chr10 21798958 21799135 vista6734 21786191 12767
VISTA
chr10 21799318 21799715 vista6735 21786191 13127
VISTA
chr10 21809167 21809536 vista6736 21786191 22976
VISTA
chr10 21816029 21816444 vista6737 21786191 29838
VISTA
chr10 21816987 21817223 vista6738 21786191 30796
VISTA
chr10 21824374 21824606 vista6739 21786191 38183
VISTA
chr10 21854145 21858379 enh67437 21786191 67954
Liver (HepG2) Neural Stem Cells (H9) Stomach
chr10 21868546 21872656 enh86858 21786191 82355
Blood (GM12878)
chr10 21876525 21882975 enh103286 21786191 90334
Peripheral Blood (MM.1S)
Transcript facotrs that regulate CASC10[ENSG00000204682.5]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr10 21788385 21789295 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21786191 2194 107902666
chr10 21788534 21789259 ZNF274 GTRD no Bone Marrow (K562) 21786191 2343 107902667
chr10 21788552 21789241 ZNF274 GTRD no Bone Marrow (K562) 21786191 2361 107902668
chr10 21789045 21789369 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21786191 2854 107902669
chr10 21789100 21789121 ZNF263 JASPAR yes 21786191 2909 21056890
chr10 21789101 21789106 ETS2 TRANSFAC yes 21786191 2910 21056891
chr10 21789103 21789124 ZNF263 JASPAR yes 21786191 2912 21056892
chr10 21789105 21789110 SP1 TRANSFAC yes 21786191 2914 21056893
chr10 21789106 21789116 SP1 JASPAR yes 21786191 2915 21056894
chr10 21789109 21789114 SP1 TRANSFAC yes 21786191 2918 21056895
chr10 21789109 21789115 SP1 TRANSFAC yes 21786191 2918 21056896
chr10 21789120 21789139 CTCF JASPAR yes 21786191 2929 21056897
chr10 21789132 21789152 PPARG JASPAR yes 21786191 2941 21056898
chr10 21789140 21789150 CUX1 JASPAR yes 21786191 2949 21056899
chr10 21789140 21789150 CUX2 JASPAR yes 21786191 2949 21056900
chr10 21789157 21789175 RARA JASPAR yes 21786191 2966 21056901
chr10 21789169 21789805 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21786191 2978 107902670
chr10 21789172 21789186 SPI1 JASPAR yes 21786191 2981 21056902
chr10 21789184 21789194 MZF1 JASPAR yes 21786191 2993 21056903
chr10 21789184 21789199 NR2C2 JASPAR yes 21786191 2993 21056904
chr10 21789200 21789211 E2F4 JASPAR yes 21786191 3009 21056905
chr10 21789213 21789389 ZNF143 GTRD no Epithelial (MCF-7) 21786191 3022 107902671
chr10 21790187 21790191 H4TF2 TRANSFAC yes 21786191 3996 21056906
chr10 21790205 21790211 NFE2 TRANSFAC yes 21786191 4014 21056907
chr10 21790225 21790236 ESRRA JASPAR yes 21786191 4034 21056908
chr10 21790245 21790255 SP1 JASPAR yes 21786191 4054 21056909
chr10 21790246 21790267 ZNF263 JASPAR yes 21786191 4055 21056910
chr10 21790247 21790258 GCM1 JASPAR yes 21786191 4056 21056911
chr10 21790248 21790258 GCM2 JASPAR yes 21786191 4057 21056912
chr10 21790274 21790279 ETS2 TRANSFAC yes 21786191 4083 21056913
chr10 21790289 21790299 MZF1 JASPAR yes 21786191 4098 21056914
chr10 21790298 21790302 ESR1 TRANSFAC yes 21786191 4107 21056915
chr10 21790330 21790342 PKNOX1 JASPAR yes 21786191 4139 21056916
chr10 21790330 21790342 PKNOX2 JASPAR yes 21786191 4139 21056917
chr10 21790330 21790342 TGIF2 JASPAR yes 21786191 4139 21056918
chr10 21790331 21790341 ID4 JASPAR yes 21786191 4140 21056919
chr10 21790332 21790341 SNAI2 JASPAR yes 21786191 4141 21056920
chr10 21790333 21790338 USF2 TRANSFAC yes 21786191 4142 21056921
chr10 21790336 21790340 NFE TRANSFAC yes 21786191 4145 21056922
SNPs associated with CASC10[ENSG00000204682.5], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr10 21311756 rs77275970 T C 469831 Esophagus 0.0674893 1250657
chr10 21552631 rs113064929 C T 228956 Heart 0.235315 1252207
chr10 21493086 rs111602840 C G 288501 Pancreas 0.170482 1251827
chr10 21383029 rs142168409 T C 398558 Ovary 0.263098 1251188
chr10 21487588 rs11012576 C G 293999 Lung 0.124597 1251803
chr10 21182034 rs113599360 C A,G 599553 Stomach 0.207596 1249709
chr10 22233847 rs12771210 G A 447656 Adrenal 0.0687269 1256232
Details of CASC10[ENSG00000204682.5]
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Genomic Location chr10:21781587-21786191[-]
TSS 21786191
Gene Name CASC10
Ensembl ID ENSG00000204682.5
ENTREZID 399726
Uniprot
Q5T4H9
Protein Name
Protein CASC10
Expression levels of CASC10[ENSG00000204682.5]
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