EnhancerDB
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Enhancers that regulate PAM16[ENSG00000217930.3]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr16 4300805 4306135 enh99309 4405608 99473
Uterus
chr16 4321625 4322178 vista21641 4405608 83430
VISTA
chr16 4330820 4352135 enh16514 4405608 53473
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr16 4343991 4344084 vista21642 4405608 61524
VISTA
chr16 4349200 4349352 vista21643 4405608 56256
VISTA
chr16 4354625 4359115 enh3863 4405608 46493
Uterus Blood (Karpas-422)
chr16 4357393 4358110 vista21644 4405608 47498
VISTA
chr16 4364365 4378605 enh16515 4405608 27003
Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas Uterus Heart
chr16 4393825 4400475 enh16516 4405608 5133
Liver Placenta Bone (Osteoblast)
chr16 4403644 4403691 vista21645 4405608 1917
VISTA
chr16 4418245 4430850 enh16517 4405608 12637
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
chr16 4420946 4421237 vista21646 4405608 15338
VISTA
chr16 4422682 4422871 vista21647 4405608 17074
VISTA
chr16 4424244 4424335 vista21648 4405608 18636
VISTA
chr16 4426208 4426420 vista21649 4405608 20600
VISTA
chr16 4427155 4427449 vista21650 4405608 21547
VISTA
chr16 4436121 4436376 vista21651 4405608 30513
VISTA
chr16 4436285 4444915 enh16518 4405608 30677
Brain (SK-N-SH) Brain (SK-N-MC) Ovary Esophagus Bone (Osteoblast) Muscle (A673) Placenta Thyroid Uterus Neural Stem Cells (H9) Thymus Stomach
chr16 4449367 4455145 enh89792 4405608 43759
Brain (SK-N-SH) Ovary Prostate (RWPE1) Spleen Blood (T-cell) Kidney
chr16 4451383 4451509 vista21652 4405608 45775
VISTA
chr16 4457425 4461575 enh109696 4405608 51817
Stomach
chr16 4460708 4460927 vista21653 4405608 55100
VISTA
chr16 4464344 4465352 vista21654 4405608 58736
VISTA
Transcript facotrs that regulate PAM16[ENSG00000217930.3]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr16 4402014 4405619 ZBTB33 GTRD no Lung (A549) 4405608 11 108176387
chr16 4402085 4405609 ZBTB33 GTRD no Lung (A549) 4405608 1 108176388
chr16 4402087 4405787 ZNF143 GTRD no Epithelial (MCF-7) 4405608 179 108176389
chr16 4402118 4405969 ZNF143 GTRD no Epithelial (MCF-7) 4405608 361 108176390
chr16 4402126 4405935 ZNF143 GTRD no Epithelial (MCF-7) 4405608 327 108176391
chr16 4402132 4404030 ZNF143 GTRD no Epithelial (MCF-7) 4405608 1578 108176392
chr16 4402135 4403659 ZNF274 GTRD no Bone Marrow (K562) 4405608 1949 108176393
chr16 4402154 4405913 ZNF143 GTRD no Epithelial (MCF-7) 4405608 305 108176394
chr16 4402165 4403699 ZNF143 GTRD no Epithelial (MCF-7) 4405608 1909 108176395
chr16 4402181 4404020 ZNF143 GTRD no Epithelial (MCF-7) 4405608 1588 108176396
chr16 4402215 4403676 ZNF143 GTRD no Epithelial (MCF-7) 4405608 1932 108176397
chr16 4403528 4403865 ZNF274 GTRD no Bone Marrow (K562) 4405608 1743 108176398
chr16 4403628 4405351 TCF7L2 GTRD no Colon (HCT116) 4405608 257 108176399
chr16 4403682 4403687 SP1 TRANSFAC yes 4405608 1921 49331266
SNPs associated with PAM16[ENSG00000217930.3], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr16 4399759 rs34047432 T A 0 Esophagus 2.70794e-14 4276296
chr16 4399759 rs34047432 T A 0 Esophagus 5.89257e-09 4276296
chr16 3598320 rs138700573 A G 783230 Heart 0.130584 4269656
chr16 5168715 rs8048557 A G 763107 Breast 0.339802 4280708
Details of PAM16[ENSG00000217930.3]
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Genomic Location chr16:4381550-4405608[-]
TSS 4405608
Gene Name PAM16
Ensembl ID ENSG00000217930.3
ENTREZID 51025
Uniprot
Q9Y3D7
Protein Name
isoform CRA_a
isoform CRA_b
Coronin
HCG15164
HCG15164
Mitochondrial import inner membrane translocase subunit TIM16
Expression levels of PAM16[ENSG00000217930.3]
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