EnhancerDB
  1. Home
  2. Gene
  3. C12orf61[ENSG00000221949.2]
Enhancers that regulate C12orf61[ENSG00000221949.2]
Back to top
Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr12 62897625 62901775 enh96312 62997214 95439
Epithelial (MCF-7)
chr12 62908805 62915018 enh47588 62997214 82196
Spleen Thymus Lung (A549)
chr12 62966945 62971095 enh103740 62997214 26119
Peripheral Blood (MM.1S)
chr12 62970708 62971108 vista13743 62997214 26106
VISTA
chr12 62983522 62983540 vista13744 62997214 13674
VISTA
chr12 62998747 62999127 vista13745 62997214 1533
VISTA
chr12 63004925 63009075 enh98977 62997214 7711
Uterus
chr12 63010185 63014335 enh108538 62997214 12971
Lung (PC-9)
chr12 63017022 63037235 enh14769 62997214 19808
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Placenta Peripheral Blood (MM.1S) Uterus Pancreas (Panc1) Neural Stem Cells (H9) Stomach
chr12 63025271 63025629 vista13746 62997214 28057
VISTA
chr12 63026443 63026842 vista13747 62997214 29229
VISTA
chr12 63046015 63058975 enh29630 62997214 48801
Skin (Keratinocyte) Prostate (PC-3) Astrocyte Thyroid Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Breast Neural Stem Cells (H9)
chr12 63051832 63051994 vista13748 62997214 54618
VISTA
chr12 63062785 63069455 enh14770 62997214 65571
Thyroid Placenta Neural Stem Cells (H9)
chr12 63067118 63067447 vista13749 62997214 69904
VISTA
chr12 63071445 63083435 enh68152 62997214 74231
Brain (SK-N-SH) Brain (SK-N-MC) Thyroid Peripheral Blood (MM.1S) Uterus Pancreas Neural Stem Cells (H9) Stomach
chr12 63086673 63087045 vista13750 62997214 89459
VISTA
chr12 63089765 63100076 enh14771 62997214 92551
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Lung (PC-9) Neural Stem Cells (H9) Thymus Heart
chr12 63091878 63091979 vista13751 62997214 94664
VISTA
chr12 63094069 63094114 vista13752 62997214 96855
VISTA
chr12 63096065 63096306 vista13753 62997214 98851
VISTA
chr12 63096618 63097002 vista13754 62997214 99404
VISTA
Transcript facotrs that regulate C12orf61[ENSG00000221949.2]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr12 62998530 62999080 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 62997214 1316 108041117
chr12 62998656 62999126 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 62997214 1442 108041118
chr12 62998662 62999026 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 62997214 1448 108041119
chr12 62998721 62999025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 62997214 1507 108041120
chr12 62998722 62998978 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 62997214 1508 108041121
chr12 62998751 62998764 DUXA JASPAR yes 62997214 1537 82420077
chr12 62998752 62998763 DUX4 JASPAR yes 62997214 1538 82420078
chr12 62998753 62998758 NFY TRANSFAC yes 62997214 1539 82420079
chr12 62998756 62999066 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 62997214 1542 108041122
chr12 62998779 62998782 MYB TRANSFAC yes 62997214 1565 82420080
chr12 62998784 62998791 NKX3-1 JASPAR yes 62997214 1570 82420081
chr12 62998792 62998807 JUND JASPAR yes 62997214 1578 82420082
chr12 62998793 62998806 DUXA JASPAR yes 62997214 1579 82420083
chr12 62998794 62998805 DUX4 JASPAR yes 62997214 1580 82420084
chr12 62998816 62998833 ZNF410 JASPAR yes 62997214 1602 82420085
chr12 62998823 62998833 SP1 JASPAR yes 62997214 1609 82420086
chr12 62998825 62998830 ETS2 TRANSFAC yes 62997214 1611 82420087
chr12 62998829 62998835 SP1 TRANSFAC yes 62997214 1615 82420088
chr12 62998830 62998835 SP1 TRANSFAC yes 62997214 1616 82420089
chr12 62998839 62998853 GATA2 JASPAR yes 62997214 1625 82420090
chr12 62998843 62998851 GATA3 JASPAR yes 62997214 1629 82420091
chr12 62998843 62998851 GATA5 JASPAR yes 62997214 1629 82420092
chr12 62998866 62998881 HSF1 JASPAR yes 62997214 1652 82420093
chr12 62998868 62998884 SOX8 JASPAR yes 62997214 1654 82420094
chr12 62998880 62998891 FOXA1 JASPAR yes 62997214 1666 82420095
chr12 62998892 62998906 STAT1 JASPAR yes 62997214 1678 82420096
chr12 62998933 62998939 LEF1 TRANSFAC yes 62997214 1719 82420097
chr12 62998933 62998939 SOX10 JASPAR yes 62997214 1719 82420098
chr12 62998937 62998947 NKX2-3 JASPAR yes 62997214 1723 82420099
chr12 62998938 62998946 ISL2 JASPAR yes 62997214 1724 82420100
chr12 62998938 62998947 NKX3-2 JASPAR yes 62997214 1724 82420101
chr12 62998944 62998959 FOXP1 JASPAR yes 62997214 1730 82420102
chr12 62998945 62998956 FOXP2 JASPAR yes 62997214 1731 82420103
chr12 62998945 62998957 FOXC2 JASPAR yes 62997214 1731 82420104
chr12 62998946 62998957 FOXC1 JASPAR yes 62997214 1732 82420105
chr12 62998947 62998958 FOXA1 JASPAR yes 62997214 1733 82420106
chr12 62998950 62998966 POU4F2 JASPAR yes 62997214 1736 82420107
chr12 62998950 62998966 POU4F3 JASPAR yes 62997214 1736 82420108
chr12 62998951 62998967 POU4F3 JASPAR yes 62997214 1737 82420109
chr12 62998953 62998967 POU4F1 JASPAR yes 62997214 1739 82420110
chr12 62998957 62998969 IRF1 JASPAR yes 62997214 1743 82420111
chr12 62999002 62999015 DUXA JASPAR yes 62997214 1788 82420112
chr12 62999003 62999014 DUX4 JASPAR yes 62997214 1789 82420113
chr12 62999014 62999017 MYB TRANSFAC yes 62997214 1800 82420114
chr12 62999015 62999027 POU2F1 JASPAR yes 62997214 1801 82420115
chr12 62999015 62999028 POU3F3 JASPAR yes 62997214 1801 82420116
chr12 62999015 62999029 POU1F1 JASPAR yes 62997214 1801 82420117
chr12 62999016 62999028 POU3F1 JASPAR yes 62997214 1802 82420118
chr12 62999016 62999028 POU3F2 JASPAR yes 62997214 1802 82420119
chr12 62999017 62999026 POU3F4 JASPAR yes 62997214 1803 82420120
chr12 62999017 62999026 POU5F1B JASPAR yes 62997214 1803 82420121
chr12 62999022 62999033 PHOX2A JASPAR yes 62997214 1808 82420122
chr12 62999022 62999033 PROP1 JASPAR yes 62997214 1808 82420123
chr12 62999028 62999032 YY1 TRANSFAC yes 62997214 1814 82420124
chr12 62999029 62999047 IRF2 JASPAR yes 62997214 1815 82420125
chr12 62999039 62999043 YY1 TRANSFAC yes 62997214 1825 82420126
chr12 62999040 62999050 NFATC3 JASPAR yes 62997214 1826 82420127
chr12 62999041 62999048 NFATC2 JASPAR yes 62997214 1827 82420128
chr12 62999091 62999106 SOX21 JASPAR yes 62997214 1877 82420129
chr12 62999096 62999099 MYB TRANSFAC yes 62997214 1882 82420130
chr12 62999099 62999103 YY1 TRANSFAC yes 62997214 1885 82420131
chr12 62999101 62999111 HOXB13 JASPAR yes 62997214 1887 82420132
chr12 62999101 62999111 HOXD13 JASPAR yes 62997214 1887 82420133
SNPs associated with C12orf61[ENSG00000221949.2], confirmed by eQTL
Back to top
Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr12 63051064 rs11174583 T C 53850 Esophagus 0.0735593 2680239
chr12 63252191 rs337514 C T 254977 Esophagus 0.149126 2682340
chr12 63139610 rs56818887 AATGC A 142396 Esophagus 0.219366 2681188
chr12 63069415 rs187098496 G A 72201 Pancreas 0.371721 2680437
chr12 63208967 rs397969352 C CTTTT 211753 Breast 0.370277 2681953
chr12 63712358 rs187375192 G T 715144 Uterus 0.192233 2684706
chr12 63308649 rs147681371 C A 311435 Liver 0.454431 2682924
chr12 62392436 rs117216888 T G 603095 Stomach 0.151086 2678143
Details of C12orf61[ENSG00000221949.2]
Back to top
Genomic Location chr12:62995531-62997214[-]
TSS 62997214
Gene Name C12orf61
Ensembl ID ENSG00000221949.2
ENTREZID
Uniprot
Protein Name
Putative uncharacterized protein encoded by LINC01465
Expression levels of C12orf61[ENSG00000221949.2]
Back to top