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Enhancers that regulate RP11-1012A1.4[ENSG00000258466.1]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr14 68079705 68083855 enh99158 68157084 73229
Uterus
chr14 68084385 68092295 enh58586 68157084 64789
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Uterus Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell)
chr14 68101125 68105435 enh51859 68157084 51649
Bone Marrow (K562) Large Intestine Muscle (A673) Thyroid Heart
chr14 68128392 68137535 enh3297 68157084 19549
Skin (Keratinocyte) Liver (HepG2) Brain (SK-N-MC) Bone (Osteoblast) Blood (GM12878) Blood (Karpas-422) Lung (PC-9) Spleen Thymus
chr14 68161499 68161767 vista18172 68157084 4415
VISTA
chr14 68169305 68174255 enh109645 68157084 12221
Stomach
chr14 68174285 68178870 enh15701 68157084 17201
Placenta Cervix (HeLa-S3)
chr14 68180025 68184475 enh15702 68157084 22941
Placenta
chr14 68200185 68208215 enh15703 68157084 43101
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Stomach Placenta Pancreas Epithelial (MCF-7)
chr14 68208817 68213087 enh64792 68157084 51733
Heart
chr14 68228225 68232915 enh15704 68157084 71141
Prostate (PC-3) Placenta
Transcript facotrs that regulate RP11-1012A1.4[ENSG00000258466.1]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr14 68161305 68162720 POLR2A UCSC Txn Factor no Conserved 68157084 4221 108108163
chr14 68161364 68161744 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4280 108108164
chr14 68161373 68161697 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4289 108108165
chr14 68161373 68161764 NFYA UCSC Txn Factor no Conserved 68157084 4289 108108166
chr14 68161379 68161739 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4295 108108167
chr14 68161406 68161926 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4322 108108168
chr14 68161407 68161767 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4323 108108169
chr14 68161417 68161793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4333 108108170
chr14 68161424 68161660 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4340 108108171
chr14 68161434 68161774 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4350 108108172
chr14 68161437 68161807 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4353 108108173
chr14 68161438 68161774 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4354 108108174
chr14 68161438 68161808 SREBP1 UCSC Txn Factor no Conserved 68157084 4354 108108175
chr14 68161438 68161808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4354 108108176
chr14 68161441 68161697 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4357 108108177
chr14 68161442 68161772 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4358 108108178
chr14 68161443 68162019 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4359 108108179
chr14 68161444 68161764 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4360 108108180
chr14 68161454 68161952 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4370 108108181
chr14 68161460 68161784 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4376 108108182
chr14 68161465 68161661 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4381 108108183
chr14 68161466 68161756 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4382 108108184
chr14 68161468 68161746 NFYB UCSC Txn Factor no Conserved 68157084 4384 108108185
chr14 68161468 68161746 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4384 108108186
chr14 68161469 68161789 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4385 108108187
chr14 68161471 68161720 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4387 108108188
chr14 68161474 68161978 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4390 108108189
chr14 68161489 68161749 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4405 108108190
chr14 68161491 68161781 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4407 108108191
chr14 68161491 68161867 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4407 108108192
chr14 68161493 68161709 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4409 108108193
chr14 68161494 68161994 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4410 108108194
chr14 68161501 68161507 HiNF-A TRANSFAC yes 68157084 4417 107567848
chr14 68161503 68161993 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4419 108108195
chr14 68161508 68161884 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 68157084 4424 108108196
chr14 68161509 68161779 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4425 108108197
chr14 68161511 68161831 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4427 108108198
chr14 68161519 68161895 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4435 108108199
chr14 68161519 68161903 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 68157084 4435 108108200
chr14 68161523 68161843 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4439 108108201
chr14 68161525 68162049 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 68157084 4441 108108202
chr14 68161531 68161935 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4447 108108203
chr14 68161539 68161899 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4455 108108204
chr14 68161540 68161820 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 68157084 4456 108108205
chr14 68161549 68161554 SP1 TRANSFAC yes 68157084 4465 107567849
chr14 68161550 68161930 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4466 108108206
chr14 68161551 68161560 ZEB1 JASPAR yes 68157084 4467 107567850
chr14 68161552 68161562 TCF4 JASPAR yes 68157084 4468 107567851
chr14 68161554 68161559 USF2 TRANSFAC yes 68157084 4470 107567852
chr14 68161558 68161563 TFAP2A TRANSFAC yes 68157084 4474 107567853
chr14 68161558 68161564 MZF1 JASPAR yes 68157084 4474 107567854
chr14 68161558 68162018 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4474 108108207
chr14 68161559 68161569 SP1 JASPAR yes 68157084 4475 107567855
chr14 68161560 68161565 ETS2 TRANSFAC yes 68157084 4476 107567856
chr14 68161560 68161960 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4476 108108208
chr14 68161565 68161921 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4481 108108209
chr14 68161572 68161792 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4488 108108210
chr14 68161574 68161578 NFE TRANSFAC yes 68157084 4490 107567857
chr14 68161579 68162249 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4495 108108211
chr14 68161581 68161792 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4497 108108212
chr14 68161584 68161940 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4500 108108213
chr14 68161585 68161895 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 68157084 4501 108108214
chr14 68161585 68161919 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 68157084 4501 108108215
chr14 68161586 68162202 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4502 108108216
chr14 68161591 68161595 H4TF2 TRANSFAC yes 68157084 4507 107567858
chr14 68161592 68161962 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 68157084 4508 108108217
chr14 68161611 68161618 NKX3-1 JASPAR yes 68157084 4527 107567859
chr14 68161611 68161952 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4527 108108218
chr14 68161614 68161629 NFYB JASPAR yes 68157084 4530 107567860
chr14 68161614 68161852 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4530 108108219
chr14 68161616 68161632 NFYA JASPAR yes 68157084 4532 107567861
chr14 68161617 68161635 NFYA JASPAR yes 68157084 4533 107567862
chr14 68161617 68161857 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 68157084 4533 108108220
chr14 68161621 68161625 H1TF2 TRANSFAC yes 68157084 4537 107567863
chr14 68161621 68161625 NFE TRANSFAC yes 68157084 4537 107567864
chr14 68161621 68161625 SRF TRANSFAC yes 68157084 4537 107567865
chr14 68161630 68161825 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4546 108108221
chr14 68161641 68161917 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4557 108108222
chr14 68161643 68161657 ZIC1 JASPAR yes 68157084 4559 107567866
chr14 68161646 68161764 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4562 108108223
chr14 68161654 68161665 FOS JASPAR yes 68157084 4570 107567867
chr14 68161654 68161665 FOSL1 JASPAR yes 68157084 4570 107567868
chr14 68161661 68161842 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 68157084 4577 108108224
chr14 68161666 68161670 LFA1 TRANSFAC yes 68157084 4582 107567869
chr14 68161666 68161680 TLX1 JASPAR yes 68157084 4582 107567870
chr14 68161676 68161842 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 68157084 4592 108108225
chr14 68161678 68161689 TFAP2A JASPAR yes 68157084 4594 107567871
chr14 68161678 68161689 TFAP2B JASPAR yes 68157084 4594 107567872
chr14 68161678 68161689 TFAP2C JASPAR yes 68157084 4594 107567873
chr14 68161686 68161698 PBX1 JASPAR yes 68157084 4602 107567874
chr14 68161696 68161700 NFE TRANSFAC yes 68157084 4612 107567875
chr14 68161698 68161708 FIGLA JASPAR yes 68157084 4614 107567876
chr14 68161700 68161705 USF2 TRANSFAC yes 68157084 4616 107567877
chr14 68161705 68161709 ESR1 TRANSFAC yes 68157084 4621 107567878
chr14 68161713 68161724 E2F6 JASPAR yes 68157084 4629 107567879
chr14 68161715 68161731 ZNF143 JASPAR yes 68157084 4631 107567880
chr14 68161736 68161746 SP1 JASPAR yes 68157084 4652 107567881
chr14 68161739 68161744 SP1 TRANSFAC yes 68157084 4655 107567882
chr14 68161739 68161745 SP1 TRANSFAC yes 68157084 4655 107567883
chr14 68161751 68161995 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4667 108108226
chr14 68161760 68161763 MYB TRANSFAC yes 68157084 4676 107567884
chr14 68161762 68162066 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 68157084 4678 108108227
SNPs associated with RP11-1012A1.4[ENSG00000258466.1], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
Details of RP11-1012A1.4[ENSG00000258466.1]
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Genomic Location chr14:68126537-68157084[-]
TSS 68157084
Gene Name RP11-1012A1.4
Ensembl ID ENSG00000258466.1
ENTREZID
Uniprot
Protein Name
Expression levels of RP11-1012A1.4[ENSG00000258466.1]
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