EnhancerDB
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Enhancers that regulate RP3-369A17.5[ENSG00000260286.1]
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Chrom. Start End Enhancer ID TSS of gene Distance between enhancer and TSS Tissues that enhancer appears More
chr6 24726145 24730295 enh110266 24799117 68822
Stomach
chr6 24737045 24747415 enh38925 24799117 51702
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Stomach
chr6 24743523 24743742 vista51343 24799117 55375
VISTA
chr6 24743891 24744276 vista51344 24799117 54841
VISTA
chr6 24745178 24745770 vista51345 24799117 53347
VISTA
chr6 24750865 24757735 enh110267 24799117 41382
Cervix (HeLa-S3) Stomach
chr6 24759805 24769215 enh55696 24799117 29902
Liver (HepG2) Large Intestine Lung (PC-9) Pancreas Stomach
chr6 24796841 24796939 vista51346 24799117 2178
VISTA
chr6 24799813 24800204 vista51347 24799117 696
VISTA
chr6 24820165 24825195 enh84135 24799117 21048
Prostate (PC-3) Cervix (HeLa-S3)
chr6 24829425 24834915 enh100478 24799117 30308
Uterus
chr6 24834309 24834321 vista51348 24799117 35192
VISTA
chr6 24852589 24865215 enh23127 24799117 53472
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Lung (PC-9) Blood (GM12878) Stomach Placenta Breast Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Thymus Heart
chr6 24875194 24887000 enh9000 24799117 76077
Prostate (PC-3) Cervix (HeLa-S3) Blood (OCI-LY7) Blood (GM12878) Placenta Blood (Karpas-422) Neural Stem Cells (H9) Blood (T-cell)
chr6 24879563 24879866 vista51349 24799117 80446
VISTA
chr6 24887279 24893621 enh9001 24799117 88162
Blood (OCI-LY7) Brain (SK-N-MC) Blood (T-cell) Blood (Karpas-422)
chr6 24896945 24910655 enh9002 24799117 97828
Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Blood (Karpas-422) Muscle (Myoblast) Thymus
Transcript facotrs that regulate RP3-369A17.5[ENSG00000260286.1]
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Chrom. Start End TF name Source Predicted site? Tissue TSS of gene Distance between TFBS and gene id More
chr6 24796841 24796846 TFAP2A TRANSFAC yes 24799117 2271 70335277
chr6 24796841 24796847 MZF1 JASPAR yes 24799117 2270 70335278
chr6 24796844 24796859 MAFK JASPAR yes 24799117 2258 70335279
chr6 24796844 24796862 NFYA JASPAR yes 24799117 2255 70335280
chr6 24796847 24796863 NFYA JASPAR yes 24799117 2254 70335281
chr6 24796850 24796865 NFYB JASPAR yes 24799117 2252 70335282
chr6 24796852 24796857 NFY TRANSFAC yes 24799117 2260 70335283
chr6 24796864 24796869 TFAP2A TRANSFAC yes 24799117 2248 70335284
chr6 24796864 24796870 MZF1 JASPAR yes 24799117 2247 70335285
chr6 24796867 24796881 BATF3 JASPAR yes 24799117 2236 70335286
chr6 24796886 24796901 HNF4G JASPAR yes 24799117 2216 70335287
chr6 24796897 24796915 MAFF JASPAR yes 24799117 2202 70335288
chr6 24796899 24796914 MAFK JASPAR yes 24799117 2203 70335289
chr6 24796899 24796920 MAFG JASPAR yes 24799117 2197 70335290
chr6 24796900 24796914 JUN JASPAR yes 24799117 2203 70335291
chr6 24796902 24796913 BATF JASPAR yes 24799117 2204 70335292
chr6 24796903 24796914 JUNB JASPAR yes 24799117 2203 70335293
chr6 24796903 24796914 NFE2L2 JASPAR yes 24799117 2203 70335294
chr6 24796904 24796915 FOS JASPAR yes 24799117 2202 70335295
chr6 24796904 24796915 FOSL1 JASPAR yes 24799117 2202 70335296
chr6 24796904 24796915 JUND JASPAR yes 24799117 2202 70335297
chr6 24796905 24796916 JUNB JASPAR yes 24799117 2201 70335298
chr6 24796905 24796919 JUN JASPAR yes 24799117 2198 70335299
chr6 24796906 24796913 JUN TRANSFAC yes 24799117 2204 70335300
chr6 24796906 24796917 BATF JASPAR yes 24799117 2200 70335301
chr6 24796911 24796916 MYC TRANSFAC yes 24799117 2201 70335302
chr6 24799813 24799828 RFX5 JASPAR yes 24799117 696 70335303
chr6 24799824 24799845 IRF1 JASPAR yes 24799117 707 70335304
chr6 24799826 24799841 PRDM1 JASPAR yes 24799117 709 70335305
chr6 24799827 24799841 STAT1 JASPAR yes 24799117 710 70335306
chr6 24799831 24799852 ZNF263 JASPAR yes 24799117 714 70335307
chr6 24799857 24799876 REST JASPAR yes 24799117 740 70335308
chr6 24799858 24799877 REST JASPAR yes 24799117 741 70335309
chr6 24799868 24799878 MSC JASPAR yes 24799117 751 70335310
chr6 24799879 24799887 FOXC1 JASPAR yes 24799117 762 70335311
chr6 24799891 24799912 IRF1 JASPAR yes 24799117 774 70335312
chr6 24799894 24799908 SPIC JASPAR yes 24799117 777 70335313
chr6 24799930 24799935 H4TF1 TRANSFAC yes 24799117 813 70335314
chr6 24799947 24799962 SOX21 JASPAR yes 24799117 830 70335315
chr6 24799961 24799965 NFE TRANSFAC yes 24799117 844 70335316
chr6 24799964 24799975 ESRRA JASPAR yes 24799117 847 70335317
chr6 24799964 24799975 ESRRB JASPAR yes 24799117 847 70335318
chr6 24799967 24799984 RARA JASPAR yes 24799117 850 70335319
chr6 24799968 24799972 ESR1 TRANSFAC yes 24799117 851 70335320
chr6 24799972 24799977 MYB TRANSFAC yes 24799117 855 70335321
chr6 24799989 24800001 PKNOX1 JASPAR yes 24799117 872 70335322
chr6 24799989 24800001 PKNOX2 JASPAR yes 24799117 872 70335323
chr6 24799989 24800001 TGIF1 JASPAR yes 24799117 872 70335324
chr6 24799989 24800001 TGIF2 JASPAR yes 24799117 872 70335325
chr6 24799989 24800003 RXRB JASPAR yes 24799117 872 70335326
chr6 24799989 24800003 RXRG JASPAR yes 24799117 872 70335327
chr6 24799992 24799996 YY1 TRANSFAC yes 24799117 875 70335328
chr6 24800001 24800016 PRDM1 JASPAR yes 24799117 884 70335329
chr6 24800044 24800060 SOX8 JASPAR yes 24799117 927 70335330
chr6 24800046 24800067 ZNF263 JASPAR yes 24799117 929 70335331
chr6 24800062 24800077 RFX5 JASPAR yes 24799117 945 70335332
chr6 24800069 24800084 MAFK JASPAR yes 24799117 952 70335333
chr6 24800077 24800092 PRDM1 JASPAR yes 24799117 960 70335334
chr6 24800078 24800082 YY1 TRANSFAC yes 24799117 961 70335335
chr6 24800080 24800101 ZNF263 JASPAR yes 24799117 963 70335336
chr6 24800082 24800087 ETS2 TRANSFAC yes 24799117 965 70335337
chr6 24800091 24800105 SPI1 JASPAR yes 24799117 974 70335338
chr6 24800094 24800101 SPIB JASPAR yes 24799117 977 70335339
chr6 24800102 24800115 NR2F1 JASPAR yes 24799117 985 70335340
chr6 24800106 24800116 RORA JASPAR yes 24799117 989 70335341
chr6 24800106 24800120 NR2F1 JASPAR yes 24799117 989 70335342
chr6 24800143 24800149 LEF1 TRANSFAC yes 24799117 1026 70335343
chr6 24800143 24800149 SOX10 JASPAR yes 24799117 1026 70335344
chr6 24800148 24800169 IRF1 JASPAR yes 24799117 1031 70335345
chr6 24800154 24800175 IRF1 JASPAR yes 24799117 1037 70335346
chr6 24800159 24800180 IRF1 JASPAR yes 24799117 1042 70335347
chr6 24800160 24800175 FOXP1 JASPAR yes 24799117 1043 70335348
chr6 24800160 24800181 IRF1 JASPAR yes 24799117 1043 70335349
chr6 24800161 24800176 STAT2 JASPAR yes 24799117 1044 70335350
chr6 24800164 24800185 IRF1 JASPAR yes 24799117 1047 70335351
chr6 24800165 24800180 FOXP1 JASPAR yes 24799117 1048 70335352
chr6 24800165 24800186 IRF1 JASPAR yes 24799117 1048 70335353
chr6 24800166 24800181 STAT2 JASPAR yes 24799117 1049 70335354
chr6 24800169 24800190 IRF1 JASPAR yes 24799117 1052 70335355
chr6 24800170 24800185 FOXP1 JASPAR yes 24799117 1053 70335356
chr6 24800170 24800191 IRF1 JASPAR yes 24799117 1053 70335357
chr6 24800171 24800186 PRDM1 JASPAR yes 24799117 1054 70335358
chr6 24800171 24800192 IRF1 JASPAR yes 24799117 1054 70335359
chr6 24800173 24800188 STAT2 JASPAR yes 24799117 1056 70335360
chr6 24800174 24800188 STAT1 JASPAR yes 24799117 1057 70335361
chr6 24800175 24800189 IRF7 JASPAR yes 24799117 1058 70335362
chr6 24800175 24800196 IRF1 JASPAR yes 24799117 1058 70335363
chr6 24800176 24800191 FOXP1 JASPAR yes 24799117 1059 70335364
chr6 24800176 24800197 IRF1 JASPAR yes 24799117 1059 70335365
chr6 24800177 24800192 PRDM1 JASPAR yes 24799117 1060 70335366
chr6 24800177 24800198 IRF1 JASPAR yes 24799117 1060 70335367
chr6 24800181 24800202 IRF1 JASPAR yes 24799117 1064 70335368
chr6 24800182 24800197 FOXP1 JASPAR yes 24799117 1065 70335369
chr6 24800182 24800203 IRF1 JASPAR yes 24799117 1065 70335370
chr6 24800184 24800199 FOXP1 JASPAR yes 24799117 1067 70335371
chr6 24800186 24800201 FOXP1 JASPAR yes 24799117 1069 70335372
chr6 24800187 24800202 FOXP1 JASPAR yes 24799117 1070 70335373
chr6 24800188 24800203 FOXP1 JASPAR yes 24799117 1071 70335374
chr6 24800189 24800204 FOXP1 JASPAR yes 24799117 1072 70335375
SNPs associated with RP3-369A17.5[ENSG00000260286.1], confirmed by eQTL
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Chrom. Position dbSNP ID Reference Allele Alternative Allele Distance between TSS and SNP Tissue q Value id More
chr6 24830306 rs56733961 C G 31189 Spleen 0.0966205 8916392
Details of RP3-369A17.5[ENSG00000260286.1]
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Genomic Location chr6:24797549-24799117[-]
TSS 24799117
Gene Name RP3-369A17.5
Ensembl ID ENSG00000260286.1
ENTREZID
Uniprot
Protein Name
Expression levels of RP3-369A17.5[ENSG00000260286.1]
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