EnhancerDB
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  3. rs10888723[chr1:52033462]
Enhancers that have rs10888723[chr1:52033462]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
chr1 52033462 52033748 vista1578
VISTA
Transcript factors that have rs10888723[chr1:52033462]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52031407 52034455 ZNF274 GTRD no Blood (GM12878) 107803247
chr1 52031462 52034298 ZNF274 GTRD no Blood (GM12878) 107803248
chr1 52031472 52034382 ZNF274 GTRD no Bone Marrow (K562) 107803249
chr1 52031505 52034179 ZNF274 GTRD no Blood (GM12878) 107803250
chr1 52031518 52034339 ZNF274 GTRD no Blood (GM12878) 107803251
chr1 52031548 52034559 ZNF274 GTRD no Bone Marrow (K562) 107803252
chr1 52031652 52034477 ZNF274 GTRD no Blood (GM12878) 107803253
chr1 52031689 52034527 ZNF274 GTRD no Blood (GM12878) 107803254
chr1 52031709 52034436 ZNF274 GTRD no Bone Marrow (K562) 107803255
chr1 52031734 52034294 ZNF274 GTRD no Blood (GM12878) 107803256
chr1 52031982 52034284 ZNF274 GTRD no Blood (GM12878) 107803257
chr1 52032009 52034201 ZNF274 GTRD no Blood (GM12878) 107803258
chr1 52032128 52033983 ZNF274 GTRD no Blood (GM12878) 107803259
chr1 52032131 52034148 ZNF274 GTRD no Blood (GM12878) 107803260
chr1 52032133 52034121 ZNF274 GTRD no Blood (GM12878) 107803261
chr1 52032138 52034243 ZNF143 GTRD no Epithelial (MCF-7) 107803262
chr1 52032150 52034015 ZNF274 GTRD no Blood (GM12878) 107803263
chr1 52032151 52034037 ZNF274 GTRD no Blood (GM12878) 107803264
chr1 52032151 52034039 ZNF274 GTRD no Blood (GM12878) 107803265
chr1 52032151 52034239 STAT3 GTRD no Blood (OCI-LY7) 107803266
chr1 52032152 52033941 ZNF274 GTRD no Blood (GM12878) 107803267
chr1 52032158 52034220 ZNF274 GTRD no Cervix (HeLa-S3) 107803268
chr1 52032190 52034251 ZNF274 GTRD no Bone Marrow (K562) 107803269
chr1 52032222 52034134 ZNF274 GTRD no Bone Marrow (K562) 107803270
chr1 52032228 52034452 ZNF274 GTRD no Liver (HepG2) 107803271
chr1 52032265 52034322 ZNF274 GTRD no Blood (GM12878) 107803272
chr1 52032280 52033976 ZNF274 GTRD no Bone Marrow (K562) 107803273
chr1 52032288 52034216 ZNF274 GTRD no Bone Marrow (K562) 107803274
chr1 52032343 52034397 ZNF274 GTRD no Bone Marrow (K562) 107803275
chr1 52032365 52034298 ZNF274 GTRD no Bone Marrow (K562) 107803276
chr1 52032379 52034240 ZBTB33 GTRD no Lung (A549) 107803277
chr1 52032411 52034063 ZNF143 GTRD no Epithelial (MCF-7) 107803278
chr1 52032419 52034021 ZNF274 GTRD no Bone Marrow (K562) 107803279
chr1 52032424 52033992 ZNF274 GTRD no Bone Marrow (K562) 107803280
chr1 52032439 52034104 ZNF274 GTRD no Bone Marrow (K562) 107803281
chr1 52032441 52034115 ZNF274 GTRD no Bone Marrow (K562) 107803282
chr1 52032474 52034034 ZBTB33 GTRD no Brain (SK-N-SH) 107803283
chr1 52032478 52034110 ZNF274 GTRD no Blood (GM12878) 107803284
chr1 52032480 52034115 ZNF274 GTRD no Bone Marrow (K562) 107803285
chr1 52032496 52034093 ZNF274 GTRD no Blood (GM12878) 107803286
chr1 52032498 52034094 ZNF143 GTRD no Epithelial (MCF-7) 107803287
chr1 52032507 52034237 ZNF274 GTRD no Blood (GM12878) 107803288
chr1 52032531 52034201 ZNF143 GTRD no Epithelial (MCF-7) 107803289
chr1 52032537 52034163 ZNF274 GTRD no Liver (HepG2) 107803290
chr1 52032540 52034291 ZBTB33 GTRD no Lung (A549) 107803291
chr1 52032545 52034128 ZNF274 GTRD no Bone Marrow (K562) 107803292
chr1 52032562 52034376 ZNF274 GTRD no Bone Marrow (K562) 107803293
chr1 52032594 52034165 ZNF143 GTRD no Epithelial (MCF-7) 107803294
chr1 52032594 52034175 ZNF274 GTRD no Bone Marrow (K562) 107803295
chr1 52032596 52034055 ZNF143 GTRD no Epithelial (MCF-7) 107803296
chr1 52032596 52034484 ZNF143 GTRD no Epithelial (MCF-7) 107803297
chr1 52032601 52034081 ZNF274 GTRD no Cervix (HeLa-S3) 107803298
chr1 52032601 52034221 ZNF274 GTRD no Liver (HepG2) 107803299
chr1 52032605 52034051 ZNF274 GTRD no Bone Marrow (K562) 107803300
chr1 52032608 52033974 ZNF274 GTRD no Bone Marrow (K562) 107803301
chr1 52032608 52034229 ZNF274 GTRD no Liver (HepG2) 107803302
chr1 52032608 52034304 ZBTB33 GTRD no Lung (A549) 107803303
chr1 52032610 52034114 ZNF274 GTRD no Liver (HepG2) 107803304
chr1 52032610 52034500 ZBTB33 GTRD no Lung (A549) 107803305
chr1 52032611 52034216 ZBTB33 GTRD no Brain (SK-N-SH) 107803306
chr1 52032616 52034015 ZNF274 GTRD no Bone Marrow (K562) 107803307
chr1 52032619 52033940 TCF7L2 GTRD no Colon (HCT116) 107803308
chr1 52032627 52034088 ZNF274 GTRD no Liver (HepG2) 107803309
chr1 52032632 52034237 ZNF274 GTRD no Blood (GM12878) 107803310
chr1 52032638 52033913 ZNF143 GTRD no Epithelial (MCF-7) 107803311
chr1 52032640 52033966 ZNF143 GTRD no Epithelial (MCF-7) 107803312
chr1 52032642 52033989 ZNF274 GTRD no Cervix (HeLa-S3) 107803313
chr1 52032652 52033928 ZNF143 GTRD no Epithelial (MCF-7) 107803314
chr1 52032652 52034541 ZNF274 GTRD no Liver (HepG2) 107803315
chr1 52032658 52034105 ZBTB33 GTRD no Brain (SK-N-SH) 107803316
chr1 52032660 52034117 ZNF274 GTRD no Liver (HepG2) 107803317
chr1 52032661 52033940 ZNF143 GTRD no Epithelial (MCF-7) 107803318
chr1 52032666 52034076 ZNF274 GTRD no Liver (HepG2) 107803319
chr1 52032669 52034036 ZNF274 GTRD no Bone Marrow (K562) 107803320
chr1 52032669 52034292 ZBTB33 GTRD no Lung (A549) 107803321
chr1 52032684 52033891 ZNF143 GTRD no Epithelial (MCF-7) 107803322
chr1 52032686 52034164 ZNF274 GTRD no Liver (HepG2) 107803323
chr1 52032708 52034351 ZNF274 GTRD no Liver (HepG2) 107803324
chr1 52032718 52033945 TCF7L2 GTRD no Colon (HCT116) 107803325
chr1 52032721 52034004 TCF7L2 GTRD no Colon (HCT116) 107803326
chr1 52032721 52034060 ZNF274 GTRD no Blood (GM12878) 107803327
chr1 52032730 52033914 TCF7L2 GTRD no Colon (HCT116) 107803328
chr1 52032732 52033932 ZBTB33 GTRD no Lung (A549) 107803329
chr1 52032734 52034073 ZNF143 GTRD no Epithelial (MCF-7) 107803330
chr1 52032737 52034207 ZBTB33 GTRD no Brain (SK-N-SH) 107803331
chr1 52032737 52034259 ZNF274 GTRD no Bone Marrow (K562) 107803332
chr1 52032750 52034067 ZNF274 GTRD no Cervix (HeLa-S3) 107803333
chr1 52032753 52034034 ZNF274 GTRD no Liver (HepG2) 107803334
chr1 52032759 52033974 ZNF274 GTRD no Bone Marrow (K562) 107803335
chr1 52032775 52034060 ZNF274 GTRD no Bone Marrow (K562) 107803336
chr1 52032806 52033814 TCF7L2 GTRD no Colon (HCT116) 107803337
chr1 52032812 52033868 ZNF274 GTRD no Liver (HepG2) 107803338
chr1 52032910 52034114 ZBTB33 GTRD no Lung (A549) 107803339
chr1 52032920 52033915 ZNF274 GTRD no Cervix (HeLa-S3) 107803340
chr1 52032933 52034127 TCF7L2 GTRD no Colon (HCT116) 107803341
chr1 52032966 52034090 ZNF274 GTRD no Bone Marrow (K562) 107803342
chr1 52032968 52034088 ZNF274 GTRD no Bone Marrow (K562) 107803343
chr1 52032999 52034078 ZNF274 GTRD no Bone Marrow (K562) 107803344
chr1 52033019 52034155 ZNF274 GTRD no Cervix (HeLa-S3) 107803345
chr1 52033041 52034157 ZNF274 GTRD no Cervix (HeLa-S3) 107803346
chr1 52033050 52034054 ZBTB33 GTRD no Brain (SK-N-SH) 107803347
chr1 52033071 52033952 ZNF274 GTRD no Bone Marrow (K562) 107803348
chr1 52033072 52034079 ZNF274 GTRD no Blood (GM12878) 107803349
chr1 52033078 52034093 ZNF274 GTRD no Liver (HepG2) 107803350
chr1 52033080 52034069 ZBTB33 GTRD no Lung (A549) 107803351
chr1 52033083 52033988 ZNF274 GTRD no Blood (GM12878) 107803352
chr1 52033086 52034129 ZBTB33 GTRD no Lung (A549) 107803353
chr1 52033094 52034170 ZBTB33 GTRD no Lung (A549) 107803354
chr1 52033099 52034091 ZNF274 GTRD no Bone Marrow (K562) 107803355
chr1 52033104 52034372 ZNF274 GTRD no Cervix (HeLa-S3) 107803356
chr1 52033105 52033961 ZNF274 GTRD no Bone Marrow (K562) 107803357
chr1 52033110 52034360 ZNF274 GTRD no Liver (HepG2) 107803358
chr1 52033120 52034095 ZNF274 GTRD no Bone Marrow (K562) 107803359
chr1 52033129 52033902 TCF7L2 GTRD no Colon (HCT116) 107803360
chr1 52033129 52034213 ZNF274 GTRD no Liver (HepG2) 107803361
chr1 52033132 52034048 ZNF143 GTRD no Epithelial (MCF-7) 107803362
chr1 52033146 52034050 ZBTB33 GTRD no Lung (A549) 107803363
chr1 52033153 52034032 ZNF143 GTRD no Epithelial (MCF-7) 107803364
chr1 52033155 52034067 ZNF274 GTRD no Bone Marrow (K562) 107803365
chr1 52033155 52034291 ZBTB33 GTRD no Brain (SK-N-SH) 107803366
chr1 52033156 52034370 ZBTB33 GTRD no Brain (SK-N-SH) 107803367
chr1 52033160 52034163 ZNF274 GTRD no Liver (HepG2) 107803368
chr1 52033160 52034203 ZNF143 GTRD no Epithelial (MCF-7) 107803369
chr1 52033161 52034489 ZNF274 GTRD no Liver (HepG2) 107803370
chr1 52033162 52034106 ZBTB33 GTRD no Brain (SK-N-SH) 107803371
chr1 52033164 52034048 ZNF274 GTRD no Blood (GM12878) 107803372
chr1 52033164 52034187 ZBTB33 GTRD no Lung (A549) 107803373
chr1 52033165 52034124 ZNF274 GTRD no Bone Marrow (K562) 107803374
chr1 52033165 52034341 ZNF274 GTRD no Cervix (HeLa-S3) 107803375
chr1 52033171 52034613 ZNF274 GTRD no Bone Marrow (K562) 107803376
chr1 52033175 52034280 ZBTB33 GTRD no Lung (A549) 107803377
chr1 52033178 52033950 ZNF274 GTRD no Bone Marrow (K562) 107803378
chr1 52033180 52033684 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803379
chr1 52033181 52034211 ZBTB33 GTRD no Brain (SK-N-SH) 107803380
chr1 52033186 52033937 ZNF274 GTRD no Liver (HepG2) 107803381
chr1 52033188 52034062 ZBTB33 GTRD no Lung (A549) 107803382
chr1 52033190 52034111 ZNF274 GTRD no Liver (HepG2) 107803383
chr1 52033192 52034155 ZNF274 GTRD no Blood (GM12878) 107803384
chr1 52033193 52034227 ZNF274 GTRD no Blood (GM12878) 107803385
chr1 52033203 52034129 ZNF274 GTRD no Bone Marrow (K562) 107803386
chr1 52033205 52033891 ZNF274 GTRD no Cervix (HeLa-S3) 107803387
chr1 52033207 52034084 ZNF274 GTRD no Blood (GM12878) 107803388
chr1 52033215 52033601 ZNF274 GTRD no Blood (GM12878) 107803389
chr1 52033224 52034059 ZNF274 GTRD no Blood (GM12878) 107803390
chr1 52033226 52033837 TCF7L2 GTRD no Colon (HCT116) 107803391
chr1 52033229 52034091 ZNF274 GTRD no Blood (GM12878) 107803392
chr1 52033234 52033764 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803393
chr1 52033235 52033902 ZNF274 GTRD no Blood (GM12878) 107803394
chr1 52033235 52034149 ZNF274 GTRD no Bone Marrow (K562) 107803395
chr1 52033235 52034302 ZNF274 GTRD no Blood (GM12878) 107803396
chr1 52033236 52034109 ZNF274 GTRD no Cervix (HeLa-S3) 107803397
chr1 52033238 52034159 ZNF274 GTRD no Liver (HepG2) 107803398
chr1 52033250 52033966 ZNF274 GTRD no Liver (HepG2) 107803399
chr1 52033257 52034246 ZNF274 GTRD no Cervix (HeLa-S3) 107803400
chr1 52033262 52033786 POLR2A UCSC Txn Factor no Conserved 107803401
chr1 52033264 52034048 ZNF274 GTRD no Blood (GM12878) 107803402
chr1 52033269 52033776 GATA3 UCSC Txn Factor no Conserved 107803403
chr1 52033270 52033786 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803404
chr1 52033277 52033773 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107803405
chr1 52033285 52034229 ZNF274 GTRD no Liver (HepG2) 107803406
chr1 52033287 52034240 ZBTB33 GTRD no Lung (A549) 107803407
chr1 52033304 52033624 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803408
chr1 52033304 52033710 TCF7L2 GTRD no Colon (HCT116) 107803409
chr1 52033306 52033776 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107803410
chr1 52033306 52033883 ZNF274 GTRD no Blood (GM12878) 107803411
chr1 52033314 52033856 ZNF143 GTRD no Epithelial (MCF-7) 107803412
chr1 52033317 52034029 ZNF274 GTRD no Blood (GM12878) 107803413
chr1 52033321 52034022 ZBTB33 GTRD no Lung (A549) 107803414
chr1 52033324 52034354 ZBTB33 GTRD no Lung (A549) 107803415
chr1 52033328 52033769 TCF7L2 GTRD no Colon (HCT116) 107803416
chr1 52033332 52033679 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107803417
chr1 52033336 52034126 ZBTB33 GTRD no Brain (SK-N-SH) 107803418
chr1 52033347 52033673 ESR1 UCSC Txn Factor no Conserved 107803419
chr1 52033349 52033605 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107803420
chr1 52033356 52033709 EP300 UCSC Txn Factor no Conserved 107803421
chr1 52033370 52033680 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107803422
chr1 52033370 52034192 ZNF274 GTRD no Blood (GM12878) 107803423
chr1 52033371 52034206 ZBTB33 GTRD no Lung (A549) 107803424
chr1 52033372 52033960 MYOD GTRD no Muscle (Myoblast) 107803425
chr1 52033379 52033709 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803426
chr1 52033385 52034263 ZNF274 GTRD no Blood (GM12878) 107803427
chr1 52033397 52034023 ZNF274 GTRD no Bone Marrow (K562) 107803428
chr1 52033408 52033766 ZNF274 GTRD no Liver (HepG2) 107803429
chr1 52033425 52033890 ZNF274 GTRD no Blood (GM12878) 107803430
chr1 52033428 52033550 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107803431
chr1 52033434 52034051 ZNF274 GTRD no Cervix (HeLa-S3) 107803432
chr1 52033436 52034142 ZNF274 GTRD no Blood (GM12878) 107803433
chr1 52033438 52033702 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107803434
chr1 52033458 52034042 ZNF274 GTRD no Blood (GM12878) 107803435
chr1 52033462 52033472 POU6F2 JASPAR yes 28851817
chr1 52033462 52033472 POU6F2 JASPAR yes 118289556
chr1 52033462 52033963 ZNF274 GTRD no Bone Marrow (K562) 107803436
Genes associated with rs10888723[chr1:52033462], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More