EnhancerDB
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  3. rs115865886[chr5:172201004]
Enhancers that have rs115865886[chr5:172201004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172198673 172201009 vista1399
VISTA
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs115865886[chr5:172201004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172200989 172201004 FOXA1 JASPAR yes 67824721
chr5 172200989 172201004 FOXA1 JASPAR yes 111955728
chr5 172200993 172201004 FOSL2 JASPAR yes 67824726
chr5 172200993 172201004 FOXA1 JASPAR yes 67824727
chr5 172200993 172201004 FOSL2 JASPAR yes 111955733
chr5 172200993 172201004 FOXA1 JASPAR yes 111955734
chr5 172200994 172201005 FOSL1 JASPAR yes 67824728
chr5 172200994 172201005 FOSL1 JASPAR yes 111955735
Genes associated with rs115865886[chr5:172201004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More