EnhancerDB
  1. Home
  2. SNP
  3. rs117696898[chr5:172201000]
Enhancers that have rs117696898[chr5:172201000]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172198673 172201009 vista1399
VISTA
chr5 172200585 172237795 enh22816
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs117696898[chr5:172201000]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172200989 172201004 FOXA1 JASPAR yes 67824721
chr5 172200989 172201004 FOXA1 JASPAR yes 111955728
chr5 172200991 172201003 FOXC2 JASPAR yes 67824722
chr5 172200991 172201003 FOXC2 JASPAR yes 111955729
chr5 172200992 172201003 BATF JASPAR yes 67824723
chr5 172200992 172201003 FOXB1 JASPAR yes 67824724
chr5 172200992 172201003 FOXC1 JASPAR yes 67824725
chr5 172200992 172201003 BATF JASPAR yes 111955730
chr5 172200992 172201003 FOXB1 JASPAR yes 111955731
chr5 172200992 172201003 FOXC1 JASPAR yes 111955732
chr5 172200993 172201004 FOSL2 JASPAR yes 67824726
chr5 172200993 172201004 FOXA1 JASPAR yes 67824727
chr5 172200993 172201004 FOSL2 JASPAR yes 111955733
chr5 172200993 172201004 FOXA1 JASPAR yes 111955734
chr5 172200994 172201005 FOSL1 JASPAR yes 67824728
chr5 172200994 172201005 FOSL1 JASPAR yes 111955735
Genes associated with rs117696898[chr5:172201000], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More