EnhancerDB
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  3. rs139245285[chr1:8198175]
Enhancers that have rs139245285[chr1:8198175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
chr1 8198088 8198334 vista230
VISTA
Transcript factors that have rs139245285[chr1:8198175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8196493 8199056 ZNF274 GTRD no Bone Marrow (K562) 107801957
chr1 8198166 8198178 PKNOX2 JASPAR yes 26518206
chr1 8198166 8198178 PKNOX2 JASPAR yes 118224176
chr1 8198167 8198177 TFAP4 JASPAR yes 26518207
chr1 8198167 8198177 TFAP4 JASPAR yes 118224177
Genes associated with rs139245285[chr1:8198175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More