EnhancerDB
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  3. rs140214575[chr1:171398554]
Enhancers that have rs140214575[chr1:171398554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
chr1 171398423 171398658 vista3866
VISTA
Transcript factors that have rs140214575[chr1:171398554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171398283 171398559 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107845398
chr1 171398553 171398561 ISL2 JASPAR yes 33079676
chr1 171398553 171398561 ISL2 JASPAR yes 118397835
chr1 171398553 171398562 NKX3-2 JASPAR yes 33079677
chr1 171398553 171398562 NKX3-2 JASPAR yes 118397836
Genes associated with rs140214575[chr1:171398554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More